| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3204 |
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| Symbol | |
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| ID | 4174981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3845545 |
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| End bp | 3847674 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056235 |
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| Product | protein of unknown function DUF940, membrane lipoprotein putative |
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| Protein accession | YP_662764 |
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| Protein GI | 109899509 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.497795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCGTA TGAAAAGAAT AAATAGCAAA CGCTTTTGTA TTGCCTATGT CAGCGCCGCT
TTGTGCTTTA CCTCAAATGT AAACGCACAG TCTAACAACG AGAATTGGAA TGTCGCTCCT
GTCGGCAGCT CATTAATGGT TCATGGTGGA ACAGGCTTAA TTCAAACTCC AACATCTCGA
ATGTTAACCG ATGGCGACTT ACGAGTGAGC TATACCGACA ACAATGAGTA TCGTTTTTGG
TCGGGAACAC TGCAGTTGTT CCCCTGGATG CAAACAACGG TAAGATACAC TGACGTGCGA
ACCCGCCTCT ACAGTCCTGT GCCAGAGTTT AGCGGGAATC AGACTTTAAA AGACAAGGGG
ATAGACGTTA AGTTTCGCGT ATTAAACGAG AGCTACTATC TACCTGAACT ATCAGTTGGC
TTCAGAGATT TTGGTGGAAC TGGTTTTTTT GAAAGTGAGT TCATCGGCTT AAGTAAACGA
GCAGGGAACT TCGATTTTCA CCTTAATATT GGATGGGGAT ATCTTGGCAC CTCGGGTAAT
GTATCAAATC CATTTTGCGA TGTGTCCGAC AACTTTTGTG AACGCCCAGG CGGTTTCACT
GGTAACGGCG GGAAAATCGA CTATCAACGT TTCTTTAAAG GACCAGCTTC AATCTTTGGC
GGTATTGAAT ACCAGACGCC ATGGGAGCCG CTGCGCTTCA AGGTAGAGTA TGAAGGCAAC
AACTACGTCA ATGATCGTGC AGGCTCACTT GAGCAGGACA GCAACTGGAA CTTTGGTGCT
AATTATCGCT GGAATAATTT TGATTTTAGT GTGAACTATC AGCGCGGTAA TACTCTCGGT
TTTGGTGTAA GTTATAACTT TAATTTACAC TCTATCTCCC AAATCAAAAT CGATAGGCCT
CCTCGCCCGC TCACTGATGA AAAAAATGAC TTTTCAATCA GTAAGATCAA TGGTCAACGA
ATGACGCAGG ATTTGTACTA TCAAGCTGGC TTCGCACTGA GCACTTCCCA CATAACAGAT
GACGAAGTCA CTATCTATGG TCAGCAAATC AGTTACAGGC ACGAAGATGA AGCAACCGAA
CGTGTAGGGC GGGTCCTCGC TTCAGAACTG CCAGAAACGG TAGATACGTA CAAGATCGTT
AATACCTCAG GTTCAGTTCC TATGGTTGAA ACGGTCGTTG ACGCAGCAGA GTTCAAACGC
CAAGCGCGAT ATGAAACATT GGAGCCAGAC TTACAACGTA GTTACCAGCG CATGGACGTC
AGCGATGAAA GTGTCAGTAA TTTTAATCCT AAAAATACTA GTGGTTTCTT TACTGGGATA
GAAACGTTTT GGATCCAAAC ATTCGGGAAC CCAGAGGAAT TTTACCTTTA TCAAGGCGGC
ATTATGGTAA ACGGCGGATA CAGTTTCGAT GGCAAAACCA GTGTCGTGGG CACAATAAAA
GCTAACTTGT TGCAGAATTT TGATAAGTTT AACTTCACTC GCGATCGTGC CCCTAGCTCG
CTGCCTAGAG TAAGAACAAA TGTTCGCGAA TATGTTTCAG GTCGGGATAT AAGCCTAGAA
AATTTATACT TACATTGGAA TAACAGAATT GCAGATAACT TATATGCTCA ATTCTATGGT
GGGTATTTAG AAACAATGTA TGGTGGCGTG GGCGGTGAAC TACTTTACCG TCCAGTTGAT
AGCAACCTAG CTTTTGGATT CGACATAAAC TACGTTCAAC AACGGTCTTG GGAGAACGAC
ATAGACTTCT ATGACTATAA GGTACTTACT GGCCACGCTA ATGTCTTTTG GCAACCCGAA
TTTTTACCTG ACACCCTTTT AACGATTAAA GTGGGCCAAT ACCTGGCTAA AGATAAAGGG
GTTACTATTG ACTTTGCCAA ACGCTTCGAC AGTGGGATTG TTGTAGGGGC ATACGCAGCG
ATAACCGATG TAAGCTCTGA AGAATACGGC GAAGGTAGCT TTACTAAAGG ATTCTACCTT
TCCATCCCCT TCGATTTGTT CTCACTTAAG CCAGCCAAAG GAAGTGGTAA AATACCGTGG
ATCCCGATTT CACGAGATGG TGGTCAAGCC CTTAATCGCC CAATCGAGCT ATTTGGTGTT
ACAAACGAAC GCTCTCCTTT CGCTCGATAG
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| Protein sequence | MSRMKRINSK RFCIAYVSAA LCFTSNVNAQ SNNENWNVAP VGSSLMVHGG TGLIQTPTSR
MLTDGDLRVS YTDNNEYRFW SGTLQLFPWM QTTVRYTDVR TRLYSPVPEF SGNQTLKDKG
IDVKFRVLNE SYYLPELSVG FRDFGGTGFF ESEFIGLSKR AGNFDFHLNI GWGYLGTSGN
VSNPFCDVSD NFCERPGGFT GNGGKIDYQR FFKGPASIFG GIEYQTPWEP LRFKVEYEGN
NYVNDRAGSL EQDSNWNFGA NYRWNNFDFS VNYQRGNTLG FGVSYNFNLH SISQIKIDRP
PRPLTDEKND FSISKINGQR MTQDLYYQAG FALSTSHITD DEVTIYGQQI SYRHEDEATE
RVGRVLASEL PETVDTYKIV NTSGSVPMVE TVVDAAEFKR QARYETLEPD LQRSYQRMDV
SDESVSNFNP KNTSGFFTGI ETFWIQTFGN PEEFYLYQGG IMVNGGYSFD GKTSVVGTIK
ANLLQNFDKF NFTRDRAPSS LPRVRTNVRE YVSGRDISLE NLYLHWNNRI ADNLYAQFYG
GYLETMYGGV GGELLYRPVD SNLAFGFDIN YVQQRSWEND IDFYDYKVLT GHANVFWQPE
FLPDTLLTIK VGQYLAKDKG VTIDFAKRFD SGIVVGAYAA ITDVSSEEYG EGSFTKGFYL
SIPFDLFSLK PAKGSGKIPW IPISRDGGQA LNRPIELFGV TNERSPFAR
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