Gene Patl_3202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3202 
Symbol 
ID4174979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3844112 
End bp3844786 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content40% 
IMG OID638056233 
Producthypothetical protein 
Protein accessionYP_662762 
Protein GI109899507 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.210249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTTA AACCTTTGAT TATTATTTTT ATTTCCGTCA TCGCTCTTTG TAGTTGTGGT 
GGGACATATC ATGCCTATTA CGAAACCTTA AAAATTGCTT TGAAAGAACC TAAAAATGCA
AGTCTGAGTT TAGATGATGT CAAAGTATCC AAAACTGATA TCATGTCAGT GATACGTGGT
GATCGACCTA CCGCAGTTAT GGCGCTAGCA TACCTCGAAA ACGGTAAACA TAAGTGGCTA
TCTAGTGATA ATGCACTGTT AGTTTTAGAA AAAGGACGGA TAGTCAGGAC AATTGGATTT
GAACGAGACC TGTTACACGT TTCAAACTCC TTTGCAGATC CCCTTAAACG TTCTCATCAT
CACTTGGCAA ATCAGCAGTG GAAAATGGCG CTAGATTGGG AAAATGACGA ATATGGTTAC
CCAGTTACAT CTACATTCGG TCAGCCGAAA TCAGAAGCGC TAACCATATT GACCAAATCA
ATCGATTCGA TACGTTTTAC CGAAACGTTG CGCTTTGAAG CCCCATCAGA ATATATCCAA
ACAAAGCACG AATGGCATAA TTACTACTGG TATGAGAAAA CCACCGGCAC GCTTATCAAA
TCTAAGCAGA CTCTCTCACC TTTGTCAGAA CCAATTGAAA TGACGTACTT AAGCCGCATT
GCGCGTTTAG ATTAA
 
Protein sequence
MHFKPLIIIF ISVIALCSCG GTYHAYYETL KIALKEPKNA SLSLDDVKVS KTDIMSVIRG 
DRPTAVMALA YLENGKHKWL SSDNALLVLE KGRIVRTIGF ERDLLHVSNS FADPLKRSHH
HLANQQWKMA LDWENDEYGY PVTSTFGQPK SEALTILTKS IDSIRFTETL RFEAPSEYIQ
TKHEWHNYYW YEKTTGTLIK SKQTLSPLSE PIEMTYLSRI ARLD