Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3202 |
Symbol | |
ID | 4174979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3844112 |
End bp | 3844786 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638056233 |
Product | hypothetical protein |
Protein accession | YP_662762 |
Protein GI | 109899507 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.210249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATTTTA AACCTTTGAT TATTATTTTT ATTTCCGTCA TCGCTCTTTG TAGTTGTGGT GGGACATATC ATGCCTATTA CGAAACCTTA AAAATTGCTT TGAAAGAACC TAAAAATGCA AGTCTGAGTT TAGATGATGT CAAAGTATCC AAAACTGATA TCATGTCAGT GATACGTGGT GATCGACCTA CCGCAGTTAT GGCGCTAGCA TACCTCGAAA ACGGTAAACA TAAGTGGCTA TCTAGTGATA ATGCACTGTT AGTTTTAGAA AAAGGACGGA TAGTCAGGAC AATTGGATTT GAACGAGACC TGTTACACGT TTCAAACTCC TTTGCAGATC CCCTTAAACG TTCTCATCAT CACTTGGCAA ATCAGCAGTG GAAAATGGCG CTAGATTGGG AAAATGACGA ATATGGTTAC CCAGTTACAT CTACATTCGG TCAGCCGAAA TCAGAAGCGC TAACCATATT GACCAAATCA ATCGATTCGA TACGTTTTAC CGAAACGTTG CGCTTTGAAG CCCCATCAGA ATATATCCAA ACAAAGCACG AATGGCATAA TTACTACTGG TATGAGAAAA CCACCGGCAC GCTTATCAAA TCTAAGCAGA CTCTCTCACC TTTGTCAGAA CCAATTGAAA TGACGTACTT AAGCCGCATT GCGCGTTTAG ATTAA
|
Protein sequence | MHFKPLIIIF ISVIALCSCG GTYHAYYETL KIALKEPKNA SLSLDDVKVS KTDIMSVIRG DRPTAVMALA YLENGKHKWL SSDNALLVLE KGRIVRTIGF ERDLLHVSNS FADPLKRSHH HLANQQWKMA LDWENDEYGY PVTSTFGQPK SEALTILTKS IDSIRFTETL RFEAPSEYIQ TKHEWHNYYW YEKTTGTLIK SKQTLSPLSE PIEMTYLSRI ARLD
|
| |