Gene Patl_3195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3195 
Symbol 
ID4174972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3837125 
End bp3837499 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content42% 
IMG OID638056226 
ProductSmpA/OmlA family lipoprotein 
Protein accessionYP_662755 
Protein GI109899500 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGA AAATAGTCAC TCGTATTGGC ATTGGCGTAG CTTTGTATGC TGTTTTCGTA 
GCAGCTGTAT TGCTGTTTTA CCCTGACAAT GCTCAAGATA TGGACTGGAA AGATCGTGAA
GAGTACAACA AGGTTCAAGT TGCTAAACTT GAATTAGGGC AAACCAAACA ACAAATATTA
GCCTTGCTCG GCGGCCCTGA TATCAGTGAA GCCAAAAAAA CCGACGGTGG GATGTATCAA
GTCATGTTCT TTCGGACGCA ACATGTAAAA TCCGACGGCA TCACAACTCA GGATGAGTGC
ACAGCACTTC TTTTGCAGAA TGACGAGTTA ATTGCTTGGG GTGACAGTGC CTACCAAGAT
TATTTAACTT TATAA
 
Protein sequence
MNKKIVTRIG IGVALYAVFV AAVLLFYPDN AQDMDWKDRE EYNKVQVAKL ELGQTKQQIL 
ALLGGPDISE AKKTDGGMYQ VMFFRTQHVK SDGITTQDEC TALLLQNDEL IAWGDSAYQD
YLTL