| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3184 |
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| Symbol | |
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| ID | 4174961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3828705 |
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| End bp | 3829463 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056215 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_662744 |
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| Protein GI | 109899489 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.575849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTAA CTATTTTGTA TCAAGACGAA TGCTTAGTCG CTATTCACAA ACCCGCTGGT
TTATTAGTAC ACAGAAGTAT GATTGACCGT CACGAAACCC AGTTTGCGAT GCAGATGCTC
AGAGACCAAA TCGGTCAGCA TGTGTTTCCG GTTCATCGTT TAGATCGCCC AACCTCCGGA
GTACTAGTGT TCGCTTTATC TGCAGATATT GCGCGCCTGC TGGGGGAGCA ATTTGCTGGT
AATACAATTG CAAAAACGTA CTTCGCCATC GTGCGCGGCC ATGTAAAAGA AGCGGGTTTG
ATTGATTATG CCCTTAAAGA AAAGCTCGAT AAAATAGCAG ATAAGCGTGC TAAACAAGAT
AAAGACGCCC AAGAAGCACA AACAGAATAC GTGCCGCTAC AGCAATTCGA GTTGCCTTTT
GCTGTCAGTC GTTATCCCTC GGCTCGATAC ACGCTCGTGC GGCTGCACCC AAAGACGGGT
CGCAAACATC AATTGCGTAG GCACATGTGC CATATTAATC ATCCCATCGT GGGTGATACC
ACTCATGGTG ATGGAAAACA CAATAAATTT ATGCGTGATC AGTTTTCATT TAATGGTTTG
GCATTGACCT GCCAACAAAT GTGCATGACA CATCCAGTAA GTAACGAAAA ATTGGCGATA
GTGAATGATT TCGATCAAAG GATGTCTACA TTGATGGTGC AATGGGGCTG GGAATTACCA
TCGTTAGATA GGTTAGATCT GCTTTCAAAT AGTCGGTAA
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| Protein sequence | MTLTILYQDE CLVAIHKPAG LLVHRSMIDR HETQFAMQML RDQIGQHVFP VHRLDRPTSG
VLVFALSADI ARLLGEQFAG NTIAKTYFAI VRGHVKEAGL IDYALKEKLD KIADKRAKQD
KDAQEAQTEY VPLQQFELPF AVSRYPSARY TLVRLHPKTG RKHQLRRHMC HINHPIVGDT
THGDGKHNKF MRDQFSFNGL ALTCQQMCMT HPVSNEKLAI VNDFDQRMST LMVQWGWELP
SLDRLDLLSN SR
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