Gene Patl_3181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3181 
SymbolrpsT 
ID4174958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3825927 
End bp3826190 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content45% 
IMG OID638056212 
Product30S ribosomal protein S20 
Protein accessionYP_662741 
Protein GI109899486 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0268] Ribosomal protein S20 
TIGRFAM ID[TIGR00029] ribosomal protein S20 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0928109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTAACA TTAAGTCTGC TAAGAAACGT GCACTACAAT CAGAAAGACG CCGCCAGCAC 
AACGCTAGCC GTCGTTCGAT GACACGTACA TCTTTGAAGA AAGTACTTGC TGCAATCGCT
TCTGGCGACA AAGCATCTGC TCAAGCTGCA TTTGCAGCTG CTACACCTTT GATTGACCGC
ATGGCAACTA AAGGTCTTAT CCATAAAAAC AAAGCTGCTC GTCATAAGAG CCGTTTGTCT
GCACAGATTA AAGCATTAGC TTAA
 
Protein sequence
MANIKSAKKR ALQSERRRQH NASRRSMTRT SLKKVLAAIA SGDKASAQAA FAAATPLIDR 
MATKGLIHKN KAARHKSRLS AQIKALA