| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3168 |
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| Symbol | |
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| ID | 4174945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3809971 |
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| End bp | 3810363 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056199 |
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| Product | prepilin-type cleavage/methylation |
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| Protein accession | YP_662728 |
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| Protein GI | 109899473 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCACCAAC ACCTCGCGTA TAATCGCTAT ATTGGATTTA GTTTGATTGA ACTGATGATT
GTGGTGACCA TCATCGGGAT ACTCGCCATG GTCGCCCTGC CCAGTTATCA AAATCACATT
GTACAGACTC GTCGTGTTGA TGCGCAAAAC GCCTTATTGA AATGGCATTT ACAACAAGAG
CGTTACCGGA TTTCCCACAC CACGTATGCT GACGAGGTCG CCTTGCCGGT ACCGACAAAT
GACTTATATG AATTTAGTGT TTCGAACATA TCTGCAACTC GTTTTATATT GCAGGCCGAA
GCGTTGTCAA CGCAACTGGC AGATACTGGC TGTACAACTC TAGCTATCAA TCAATCTATG
ACACAGTCTC CGGCAAATTG CTGGCCCCGA TAA
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| Protein sequence | MHQHLAYNRY IGFSLIELMI VVTIIGILAM VALPSYQNHI VQTRRVDAQN ALLKWHLQQE
RYRISHTTYA DEVALPVPTN DLYEFSVSNI SATRFILQAE ALSTQLADTG CTTLAINQSM
TQSPANCWPR
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