Gene Patl_3167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3167 
Symbol 
ID4174944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3809226 
End bp3809687 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content46% 
IMG OID638056198 
Producthypothetical protein 
Protein accessionYP_662727 
Protein GI109899472 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTAA TGACGCTTGG CGTCCCCTCA TTATTAGATT CAAAACAGCA GCTACATATT 
AAGCAAGCGG CACAAGAGAG CTATTTCTTT ATGCAACACG CTCGCGCAAG TGCTATCGCG
TCTGGGCAGA ATATATTCGT TACTATTCAA GACGGCCAAG CATGGTGCCT AGGTATGAAC
CTATCCGAAG TATGTAATTG TCGAATCGAA GACAGTTGCT CAGTGTTGGG AGTGCAGTCG
CGCATTCAAC ATAGTGATTT TTCCTCTGTA CAACTGACGC AATTGCGCTT TGGGCAGAAT
GATAGTGCGG TATTTGACGG CGCAAGAGGC ATGGCCATGG GGGATTCAGG CTCGTTGATT
TTTGGTGATA CGACGGATGA ACTCAAACTT ATTGTGAGTA ATATGGGGCG GGTTCGTCTG
TGCGTGAACG AAGGTGATAT TGTGGCATAC AGACAATGTT GA
 
Protein sequence
MILMTLGVPS LLDSKQQLHI KQAAQESYFF MQHARASAIA SGQNIFVTIQ DGQAWCLGMN 
LSEVCNCRIE DSCSVLGVQS RIQHSDFSSV QLTQLRFGQN DSAVFDGARG MAMGDSGSLI
FGDTTDELKL IVSNMGRVRL CVNEGDIVAY RQC