| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3156 |
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| Symbol | |
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| ID | 4174933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3799456 |
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| End bp | 3801060 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056187 |
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| Product | L-aspartate oxidase |
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| Protein accession | YP_662716 |
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| Protein GI | 109899461 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase |
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| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00307505 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTCCA CTGTTGAACA TCGTTGTGAC GTACTAATTA TAGGCAGCGG CGCTGCCGGA
CTTAGCCTAG CATTGAAATT GGCTGAGCAT TGCCAAATTA TCGTTTTAAG TAAAAGTAGT
TTAGCGGAAG GGTCGACACG ATATGCCCAA GGCGGTATCG CCGCTGTATT CGACGAAGAC
GATTCAATCG AATCCCACGT AAAAGATACG CTTAATGCAG GTGCAGGCTT ATGCGATGAA
CAAGCGGTTC ACTTTACTGC TTCTCGAGCA AAAACCTGCA TGCAGTGGTT GATTGACTTC
GGTATGCCGT TCGATCAAAT GACCGACACC AACGATGGTG AACAGCGTTA TCATCTTACA
CGTGAAGGTG GGCACAGCCA CAGGCGTATC TTGCACGCAG CCGATGCGAC CGGGGAAGCC
GTTCAAGTCA CTTTAATCGA AGCGGTCAAA CAGCATCCGA ATATTCATAT ATTTGAACGT
TATAATGCGG TTGATCTAAT CAAAAGCAAG GATGAGCAAA ATCAGTTGTT AGGCGCCTAT
GTGTGGAACC GAAAACATGA ACATGTTGAA GTGATCCGCA GCAAATTCAC CGCACTTGCC
ACTGGTGGCG CCAGCAAAGT TTATCAATAT ACTTCCAACC CAGATGTTTC CAGTGGTGAT
GGAATAGCCA TGGCGTGGCG TGCTGGTTGC AGCGTTGCTA ATATGGAGTT TAATCAATTC
CACCCAACCT GTTTATTTCA TCCTGAAGCA CGCAACTTTT TGATCAGTGA AGCTCTGCGC
GGTGAAGGCG CCTTTTTATG CCACGCAGAT GGCACGCCTT TCATGCAAAA ATTCGATGAG
CGTGGTGACT TGGCTCCAAG AGATATAGTC GCACGGGCCA TTGATTTCGA AATGAAACGC
CTTGGTGCCG ATTGCATGTA TTTAGATATC AGTCATAAAC CCGCTGATTT TATTAAAAAG
CATTTCCCTA ACATCTATCG TAAGTGTCGC GCGTTGGGCA TCGATATCAC CAGACAGCCC
ATCCCTGTCG TACCAGCAGC ACATTATAGC TGTGGCGGTG TGGTGACTGA CTTTAATGCA
AAAACCGACT TAGATAACCT GTACGCGCTA GGTGAGGTAG CATATACCGG TTTGCATGGT
GCAAATCGCA TGGCCAGTAA CTCGTTGCTT GAATGCATAG TGTTTGCTCA CTCAGCCGCT
GATCACATTA TCAAGCGCTT GACTGACGGG GACTCAAATG AGGGTATTCA GCCTTGGGAT
GAGTCACAAG TGGGCGACTC AGACGAGGAA GTTATTATTC AGCATAATTG GCATGAGTTA
CGTCTTTTCA TGTGGGATTA CGTGGGGATC GTGCGCACTG ACAAGCGCTT AGCAAGAGCG
CAGCATAGAA TCGAACTGTT AAAACAAGAA GTGGATGAGT ACTACTCTTA CTTCAGAGTG
AGCAATAATT TATTGGAACT GCGTAATCTA CTGACCGTTG CTGAGCTTAT CGTTAAGTGT
GCGCAGCAAC GCAAGGAAAG CCGTGGCTTA CACTACAACT TAGACTACCC TGGCTTGCTC
GAAAACCCGA GCCCGTCGGT TATCCCAGGG AAAATCACCA AATAG
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| Protein sequence | MHSTVEHRCD VLIIGSGAAG LSLALKLAEH CQIIVLSKSS LAEGSTRYAQ GGIAAVFDED
DSIESHVKDT LNAGAGLCDE QAVHFTASRA KTCMQWLIDF GMPFDQMTDT NDGEQRYHLT
REGGHSHRRI LHAADATGEA VQVTLIEAVK QHPNIHIFER YNAVDLIKSK DEQNQLLGAY
VWNRKHEHVE VIRSKFTALA TGGASKVYQY TSNPDVSSGD GIAMAWRAGC SVANMEFNQF
HPTCLFHPEA RNFLISEALR GEGAFLCHAD GTPFMQKFDE RGDLAPRDIV ARAIDFEMKR
LGADCMYLDI SHKPADFIKK HFPNIYRKCR ALGIDITRQP IPVVPAAHYS CGGVVTDFNA
KTDLDNLYAL GEVAYTGLHG ANRMASNSLL ECIVFAHSAA DHIIKRLTDG DSNEGIQPWD
ESQVGDSDEE VIIQHNWHEL RLFMWDYVGI VRTDKRLARA QHRIELLKQE VDEYYSYFRV
SNNLLELRNL LTVAELIVKC AQQRKESRGL HYNLDYPGLL ENPSPSVIPG KITK
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