| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3151 |
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| Symbol | |
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| ID | 4174928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3794371 |
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| End bp | 3796167 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056182 |
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| Product | GTP-binding protein LepA |
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| Protein accession | YP_662711 |
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| Protein GI | 109899456 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000523336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACACA AGCACATACG TAACTTCTCG ATCATCGCCC ATATTGACCA TGGTAAATCC
ACACTTTCGG ATCGTTTAAT CCAGCATTGT GGTGGTCTAT CCGAACGCGA AATGTCAGCG
CAAGTTCTCG ATTCAATGGA TATTGAGCGC GAACGCGGTA TTACCATTAA GGCTCAGAGT
GTCACGCTCA ACTACAAAGC GAGAGATGGT GAAACTTACC AACTAAACTT CATTGATACG
CCGGGGCACG TGGATTTCTC CTACGAGGTG TCGCGTTCTT TAGCTGCCTG TGAAGGTGCG
CTTTTGGTCG TAGATGCAGG CCAAGGTGTT GAGGCGCAAA CACTCGCTAA CTGTTACACA
GCCATCGATT TGAATATGGA AGTGGTGCCG ATTTTAAATA AAATCGATTT ACCTCAAGCG
GAGCCTGACC GCGTAGCTGA AGAGATCGAA GACATTGTGG GTATTGACGC AATCGATGCC
GTACGTTGCT CTGCTAAAAC CGGTATTGGT ATTGAAGATG TACTTGAAGT GATTGTACGC
CAAATTCCGC CACCAGAAGG TGATATTGAC GCCCCACTAA AAGCCCTTAT TGTAGATTCT
TGGTTCGATA ACTACCAAGG TGTCGTGTCG TTGGTGCGTA TCGTCCAGGG CGAGTTACGC
AAGAATGATA AGATTAAAAT TATGTCGACG GGTGTGGTGC ATCAAGCCGA TAAAGTCGGT
ATTTTCACGC CTAAAGCCAC AGACACCGGT ATATTACGTG CAGGCGAAGT AGGTTTTATC
GTTGCGGGCA TCAAAGAAAT TCACGGTGCA CCCGTGGGCG ATACGATTAC TCTTGCTCGC
GCACCTGCGG ATGCGGCGCT ACCGGGTTTC AAAAAAGTGA AGCCTCAGGT TTACGCAGGG
CTTTTCCCTA TTAGCTCAGA TGACTATGAA GATTTTCGGG ATGCACTGGC TAAACTTAGT
TTGAATGATG CGTCTTTGTT CTTTGAACCT GAAAGCTCAT CAGCTCTGGG TTTTGGTTTC
CGCATTGGTT TCCTTGGCAT GTTGCACATG GAAATTATTC AAGAGCGCTT AGAGCGCGAG
TACGATTTAG ATTTGATCAC CACTGCGCCA ACGGTAGTTT ACGAAGTTGT GACCACTGAT
GGTGAAACGC TTTACGTAGA TAATCCTTCA AAGTTACCAC CCGTTAACTC CATCGATGAA
ATCCACGAAC CTATCGTAGA AGCCCACATA CTTGTGCCGC AAGAGTATTT AGGCAGCGTT
ATTACCTTGT GTGTAGATAA GCGTGGTGTA CAAACCAGCA TGACTTATCA TGGCAAGCAA
GTGGCGGTGA CTTATGAACT GCCTATGGCC GAAGTCGTTA TGGACTTTTT CGATAAGCTC
AAATCCACAA GCCGTGGTTT TGCATCACTT GATTACAATT TCAAACACTT CCAAACAGCT
GAAATGTCTA GACTGGATAT TCTTATCAAT GGCGAACGAG TGGATGCGCT TGCGATGATC
ACCCATAAGG ACAATGCTCA ATCTCGTGGG CGTGATTTGG TTGAAAAGTT GCGTGAGCTG
ATCCCGCGTC AAATGTTCGA TATTGCTATT CAAGCTGCTA TCGGCAACCA GATAGTAGCG
CGTAGCACGA TCAAGCAATT GCGTAAAAAC GTAATCGCCA AATGTTACGG TGGTGATGTG
AGTCGTAAGA AGAAACTTCT TCAGAAACAA AAAGACGGTA AGAAACGTAT GAAGTCAGTG
GGTAACGTTG AACTTCCTCA AGAAGCGTTC CTTGCTCTAC TTAAGGTAGG TAAGTAA
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| Protein sequence | MQHKHIRNFS IIAHIDHGKS TLSDRLIQHC GGLSEREMSA QVLDSMDIER ERGITIKAQS
VTLNYKARDG ETYQLNFIDT PGHVDFSYEV SRSLAACEGA LLVVDAGQGV EAQTLANCYT
AIDLNMEVVP ILNKIDLPQA EPDRVAEEIE DIVGIDAIDA VRCSAKTGIG IEDVLEVIVR
QIPPPEGDID APLKALIVDS WFDNYQGVVS LVRIVQGELR KNDKIKIMST GVVHQADKVG
IFTPKATDTG ILRAGEVGFI VAGIKEIHGA PVGDTITLAR APADAALPGF KKVKPQVYAG
LFPISSDDYE DFRDALAKLS LNDASLFFEP ESSSALGFGF RIGFLGMLHM EIIQERLERE
YDLDLITTAP TVVYEVVTTD GETLYVDNPS KLPPVNSIDE IHEPIVEAHI LVPQEYLGSV
ITLCVDKRGV QTSMTYHGKQ VAVTYELPMA EVVMDFFDKL KSTSRGFASL DYNFKHFQTA
EMSRLDILIN GERVDALAMI THKDNAQSRG RDLVEKLREL IPRQMFDIAI QAAIGNQIVA
RSTIKQLRKN VIAKCYGGDV SRKKKLLQKQ KDGKKRMKSV GNVELPQEAF LALLKVGK
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