| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3150 |
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| Symbol | |
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| ID | 4174927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3793465 |
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| End bp | 3794370 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056181 |
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| Product | signal peptidase I |
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| Protein accession | YP_662710 |
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| Protein GI | 109899455 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0681] Signal peptidase I |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000379573 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAATT ATTTTTCATT GTTTTTAGTG GTACTTACCC TAGCATCAGG CCTCATTTGG
CTTGCTGACT CTTTAATGTT CGCACCAAAA CGTAAAGAAC GAGCGGTGAC AGGGGAAGAC
GGCTCCAGTG TGACCGGCGA CCCAGAAGAG CAAACATTAC CTTGGCTGGT GGATACGTCT
CAACAAATTT TTCCCGTCAT AGCGTTTGTA TTGGTGTTAC GTTCGTTTCT ATATGAACCG
TTTCAAATTC CATCAGGTTC GATGATGCCT ACCTTGTTAG TGGGTGACTT TATTCTGGTT
GAAAAATACG CCTACGGAGT AAAAGACCCT GTCTTCAGAA GTAAATTTTG GGACACAGGT
GTGCCAGAGC GCGGAGATGT TGCGGTATTT AAGTACCCCA AAAATCCTAG CCAAGATTAC
ATTAAGCGAG TGATTGGCTT ACCAGGTGAC ACGGTTATTT ACCGAAACAA GCAGCTATTT
GTTAAGCCAG CGTGTAACTC AGGTAAAGAC TGCTCCGCAA TTGAACCGGT AGAATTAAAC
TTTGTTGATC GCGGTGAGGC TTATCAAAAC TTTGTGCCTC TGGAAAAGTA CCAAGAAAAA
CTAGGTGAAG TAACACATGA TATCTTCCGT TTACCCAGTA ATTTGAATCG TACGCAGGAT
TATTATCAGC AACCCGGCAC ACAAGCCGAT GAGTGGATAG TCCCTGAAGG CCAGTATTTC
ATGATGGGTG ATAATCGTGA TAACAGCTTA GACGGTCGTT TCTGGGGATT CGTTCCGGAT
GCAAACCTAG TTGGCAAAGC CGTGGCGATT TGGATCAGTT TCGAGTTCGA CCGTGCCCCT
AGTAGCTGGG TACCAAGCTG GATCCCAACC GACGTACGTT TTAATCGAGT AGGTAGCATT
ATTTAG
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| Protein sequence | MANYFSLFLV VLTLASGLIW LADSLMFAPK RKERAVTGED GSSVTGDPEE QTLPWLVDTS
QQIFPVIAFV LVLRSFLYEP FQIPSGSMMP TLLVGDFILV EKYAYGVKDP VFRSKFWDTG
VPERGDVAVF KYPKNPSQDY IKRVIGLPGD TVIYRNKQLF VKPACNSGKD CSAIEPVELN
FVDRGEAYQN FVPLEKYQEK LGEVTHDIFR LPSNLNRTQD YYQQPGTQAD EWIVPEGQYF
MMGDNRDNSL DGRFWGFVPD ANLVGKAVAI WISFEFDRAP SSWVPSWIPT DVRFNRVGSI
I
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