| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3146 |
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| Symbol | |
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| ID | 4174923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3790384 |
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| End bp | 3791154 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056177 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_662706 |
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| Protein GI | 109899451 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.30888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCGATA GTCACTGTCA CTTAGATTTC CCCGCTTTTG ATCTCGATCG CGACCAAGTG
TTGCAAAAAT GTGCTCAGCT CGGGGTTAAT TCAATTGTCA TTCCAGGCAC TCAAGCAAGG
CTGTGGCCAC GGCAAGTTTC ACTGTGCGAG TCGTACTCGC AGCTTAAGTT CGCGTTAGGT
TTGCACCCCT ACTTTTTGCA CAATTACCGC AGTGAGCAAT TACAAATGTT GGACCAACAG
CTATCCTTGC ACCAAGATAA GGTCGTTGCC GTTGGAGAAA TTGGTTTGGA TTTCAGTCTG
CCCACTGACG AAGTGCTGCA GGAGCGAGTG TTTAGTGAAC AGCTCAATTT GGCTCACCAG
CATCAGCTAC CTGTCATTGT GCACCATAGG CAATCTCATA ATGCGTTGAT TAGGCTGCTA
AAAAAAAGTA AGTTTTGTAA TGGCGGCATT ATTCATGCTT TTTCGGGTAG CCTTCAAGAA
GCACGGACGT ATATTGACCT AGGCTTTAAG TTAGGCATTG GCGGCACCAT TACCTACCCT
AGAGCGAAGA AAACACGCGC AGTGATCGCT CAAGTTCCCC TTTCGAGCTT GGTGTTAGAA
ACCGACGCTC CTGATATGCC TATTAATAGT AAACAAGGTG AACGTAACAG CCCGAGCTAT
TTACCGATTA TCTTGAATGC ACTTCAAGCT TTGAGGACGG AACCTGAAAA CGACGTTAAG
CAGGCATGTT GGCAAAACAC CCTTGATATC TTGCCCAATA TATTAAACTA A
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| Protein sequence | MIDSHCHLDF PAFDLDRDQV LQKCAQLGVN SIVIPGTQAR LWPRQVSLCE SYSQLKFALG
LHPYFLHNYR SEQLQMLDQQ LSLHQDKVVA VGEIGLDFSL PTDEVLQERV FSEQLNLAHQ
HQLPVIVHHR QSHNALIRLL KKSKFCNGGI IHAFSGSLQE ARTYIDLGFK LGIGGTITYP
RAKKTRAVIA QVPLSSLVLE TDAPDMPINS KQGERNSPSY LPIILNALQA LRTEPENDVK
QACWQNTLDI LPNILN
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