| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3134 |
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| Symbol | |
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| ID | 4174907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3775742 |
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| End bp | 3778108 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056161 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_662694 |
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| Protein GI | 109899439 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000324341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAG AGAATGTTGA TTACACAGAA ATGCCGGTCT TGGCATTGCG TGATGTGGTG
GTTTATCCGC ATATGGTTAT TCCCTTATTT GTCGGTCGCG AGAAGTCGAT ACGTTGCTTA
GAAGCTGCGA TGGATAAAGA CAAACAAATA TTTTTAGTCG CGCAAAAAGA CGCCAGTACC
GATGAGCCAC AGCCTGATGA TATTTTTACT GTCGGCACCA TAGCGACCAT TTTGCAGCTG
TTAAAGTTAC CAGACGGCAC AGTGAAAGTG TTGGTTGAAG GTAATCAGCG TGCTCAAATT
GCTGAATTTG TTAGCACCGA TGATTTTTTC ATCGCAAATA TTTCGAATAA AGACGACCTT
GAAGTCGAAG AGAATGAGCA AGAAGTCATT ATTCGCTCAG CGATTTCTCA GTTTGAAGGG
TATGTAAAAC TTAATAAAAA GATCCCACCT GAAGTACTGA CTTCGTTAAG CGGGATTGAG
CAAGCTGCTC GCCTAGCCGA TACCATGGCA GCGCATATGC CCCTTAAATT AGCTGAAAAG
CAAAAAGTAT TAGAAATGGA TCAAGTTAAC GATCGTCTTG AATACTTGAT GGCATTGATG
GAAAGTGAAA TAGATTTGCT GCAGGTCGAG AAAAAAATTC GTACCCGCGT TAAAAAACAG
ATGGAGAAGA GTCAGCGCGA GTATTATTTG AATGAGCAAA TGAAAGCCAT CCAAAAAGAA
CTCGGTGAAC TAGACGAAGC GCCTGACGAA TTTGAAGCGC TAAGCAAAAA AATCGACGAC
GCTAAGATGC CAGAAGAAGC TAAGAAAAAA GCAACGACCG AACTTAGCAA ATTAAAAATG
ATGTCACCTA TGTCTGCCGA AGCCACCGTG GTGCGTAGCT ACATCGATTG GCTAACCAAT
GTGCCTTGGA CTAAACGCAG TGCAGTGAAG AAAGATTTAG CTGCCGCTGA TAAGTTGCTT
GATACGGAGC ACTACGGGCT TGAAAAGGTC AAAGAACGTA TTATTGAGTA TCTAGCAGTT
CAACAACGCG TTAGAAAGCT CAAAGGACCA ATATTATGCT TAGTGGGCCC TCCAGGGGTG
GGTAAAACCT CACTGGGCCA GTCTATTGCC AAAGCAACAG GTCGCAAATA CGTGCGCATG
GCGTTAGGCG GTGTTCGTGA TGAAGCAGAA ATACGCGGCC ACAGACGTAC TTACATCGGC
TCTATGCCGG GTAAGTTGAT CCAGAAAATG GCAAAAGTGG GGGTGAAAAA TCCACTGTTT
TTACTTGATG AAATCGACAA AATGTCTTCT GACATGCGTG GAGATCCATC TTCAGCGTTA
TTAGAAGTGC TTGACCCTGA GCAAAACAGC ACGTTTAGTG ATCACTACTT AGAAGTTGAT
TATGATCTGT CTGACGTCAT GTTTGTTGCT ACGTCGAACA GTATGGACAT TCCCGGACCG
TTGTTGGACA GAATGGAAGT GATTCGTTTA TCTGGCTACA CAGAAGATGA AAAACTAAAC
ATCGCCACAC GCCACTTACT TGAGAAACAA ATCAGTCGTA ATGGTTTGAA GAGCAAAGAG
TTAGTGATCG AAGAGTCCGC GATCATTGGT ATGATCCGTC ACTACACGCG TGAAGCGGGT
GTGCGTAGCT TAGAGCGGGA AATATCCAAA GTGTGCCGCA AAGCGGTGAA AAATATTTTG
CTCAACAAAG ACATAAAGTC CGTCACTGTC TCTCAAGATA ATCTGTCTGA ATATCTAGGT
GTGCAACGCT TTGATTACGG AAAGGCAGAA AACAATAACC AGATTGGCCA AGTAACAGGG
TTGGCTTGGA CTCAGGTCGG TGGGGAGCTG TTGACCATTG AGGCGACATC GGTCGTGGGC
AAAGGCAAGA TGACCTCAAC GGGCTCGTTG GGTGATGTCA TGCAAGAGTC GATACAAACG
GCGATGACGG TGGTGCGTAG TCGAGCTGAA AAGCTGCGTA TCAACAGTGA TTTTCATGAG
AAGCGTGACA TTCACGTGCA CGTACCTGAA GGGGCAACCC CTAAAGATGG GCCGAGTGCT
GGTATTGGCA TGTGCACGGC ATTGATTTCT GCACTTACGG GCAATCCTGT GCGCTGTGAT
GTGGCCATGA CAGGTGAAAT TACTTTACGG GGCGAAGTGC TTGCAATTGG CGGTTTGAAA
GAGAAACTGC TGGCAGCACA CAGAGGCGGA ATAAAAACGG TTATCATTCC GAAAGAGAAC
GAACGCGATT TACAAGAGAT CCCAGATAAT GTAAAACAAG ACCTGTCAAT TCATCCTGTG
CGCTGGATTG ATGATGTTTT AGAGCTGGCA TTACAAGAAA ATCCCGAGCG TTTTAGCCTT
GAAAAGCCAA GCAAGGGTAA AAAATAG
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| Protein sequence | MTKENVDYTE MPVLALRDVV VYPHMVIPLF VGREKSIRCL EAAMDKDKQI FLVAQKDAST
DEPQPDDIFT VGTIATILQL LKLPDGTVKV LVEGNQRAQI AEFVSTDDFF IANISNKDDL
EVEENEQEVI IRSAISQFEG YVKLNKKIPP EVLTSLSGIE QAARLADTMA AHMPLKLAEK
QKVLEMDQVN DRLEYLMALM ESEIDLLQVE KKIRTRVKKQ MEKSQREYYL NEQMKAIQKE
LGELDEAPDE FEALSKKIDD AKMPEEAKKK ATTELSKLKM MSPMSAEATV VRSYIDWLTN
VPWTKRSAVK KDLAAADKLL DTEHYGLEKV KERIIEYLAV QQRVRKLKGP ILCLVGPPGV
GKTSLGQSIA KATGRKYVRM ALGGVRDEAE IRGHRRTYIG SMPGKLIQKM AKVGVKNPLF
LLDEIDKMSS DMRGDPSSAL LEVLDPEQNS TFSDHYLEVD YDLSDVMFVA TSNSMDIPGP
LLDRMEVIRL SGYTEDEKLN IATRHLLEKQ ISRNGLKSKE LVIEESAIIG MIRHYTREAG
VRSLEREISK VCRKAVKNIL LNKDIKSVTV SQDNLSEYLG VQRFDYGKAE NNNQIGQVTG
LAWTQVGGEL LTIEATSVVG KGKMTSTGSL GDVMQESIQT AMTVVRSRAE KLRINSDFHE
KRDIHVHVPE GATPKDGPSA GIGMCTALIS ALTGNPVRCD VAMTGEITLR GEVLAIGGLK
EKLLAAHRGG IKTVIIPKEN ERDLQEIPDN VKQDLSIHPV RWIDDVLELA LQENPERFSL
EKPSKGKK
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