| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3130 |
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| Symbol | ndk |
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| ID | 4174903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3772284 |
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| End bp | 3772715 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056157 |
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| Product | nucleoside diphosphate kinase |
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| Protein accession | YP_662690 |
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| Protein GI | 109899435 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0105] Nucleoside diphosphate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0990343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCTTAG AACGTACTTT TTCAATTATC AAACCAGACG CAGTTGCTAA AAATGTAATC
GGCGCAATCT ACAACCGTTT CGAAAGCGCA GGTCTACGCA TTGTTGCCTC TAAAATGCTT
CACCTTAGTA AAGAACAAGC TGAAGGTTTC TATGCCGAGC ATAGCGAACG TCCTTTCTTC
GGCGCTTTGG TTGAATTCAT GACTTCAGGT CCAGTAATGG TTCAGGTTTT AGAAGGCGAA
AACGCTGTTC TTAAGAACCG TGAAATCATG GGTGCAACTA ACCCTGCAGA AGCACTTGCT
GGTACATTGC GTGCAGACTA CGCTGCATCA ATCGACGAAA ATGCGTGTCA CGGTTCAGAT
GCGCCTGAGT CAGCAGCACG TGAGATTGCA TACTTCTTCT CTGACGAAGA AATCTGCCCA
CGCACTCGTT AA
|
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| Protein sequence | MALERTFSII KPDAVAKNVI GAIYNRFESA GLRIVASKML HLSKEQAEGF YAEHSERPFF
GALVEFMTSG PVMVQVLEGE NAVLKNREIM GATNPAEALA GTLRADYAAS IDENACHGSD
APESAAREIA YFFSDEEICP RTR
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