Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3129 |
Symbol | |
ID | 4174902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3771009 |
End bp | 3772151 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056156 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_662689 |
Protein GI | 109899434 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAGAAG TGATGTCAGC AAAACCGACT AAAATCAATT TACTCAACTT TAACCGAGCG GGTTTAAGAG AGTATTTTAG TTCGATTGGC GAAAAGCCAT TTCGTGCCGA CCAAATGATG AAATGGATTT ATCAAGCTGG GGTGTCAGAC TTTGATCAAA TGACTAATTT GAACAAAGCG TTACGTGAAA AGCTAAAAGC GCAATGTGAA GTCAAAGCGC CAGAAATCGC TTATCAGCAA GGCGCAAGTG ATGGCACGAT TAAATTTGCG TTACGCCTAG AAGGCGGACA AGAAGTTGAA ACTGTGTGGA TCCCTGATGA AGACCGCGCG ACCTTATGCG TGTCGTCACA AGTTGGCTGC GCCCTAGAAT GCACTTTTTG CTCGACCGCT CAGCAAGGTT TTAACCGCAA TTTAAGTGTG TCTGAAATTA TCGGTCAGGT GTGGCGCGTA GCAACGACCA TCGGTTTATC TAATGATAGT GCCAAACGTC CCATTACTAA TGTGGTCATG ATGGGGATGG GCGAGCCGCT GTTAAACTTG AAGAATGTGG TGCCGGCGAT GGATTTAATG CTTGACGATC TCGCATTTGG TTTATCAAAA CGCCGTGTGA CCTTGAGTAC TTCAGGAGTG GTGCCTGCAC TTGATATGTT AGGCGATCAG ATAGATGTAG CGCTGGCTAT TTCGCTTCAT GCCCCGGACG ACAAGTTGCG TGATGAAATT GTGCCAATTA ACAAAAAATA TCCTATTCAA GAATTTTTAG CTGGGGTGCG CCGTTATCTA GCTAAATCGA ATGCTAACCA AGGTAAAGTG ACAGTAGAGT ATGTCATGCT CAACGGTATC AATGACAGTA CCGACCAAGC CCATGAACTG GCGAAAGTAT TGGCCGATAC GCCATGTAAA ATTAACTTGA TTCCGTTTAA TCCTTATCCG GGCTCTCCTT ATAGTCGCTC GAGTAACTCA CGCATTGATC GCTTCGCGAA AGTGCTTTCG AGTTACGGCT TGATGGTAGT CGTGCGTAAG ACTCGAGGGG ATGATATTGA TGCAGCCTGT GGTCAACTTG TGGGCGACGT GGTTGATAGA ACTAAACGAA TGTTGAAAAA ACAGATGAAG GGTGATGAAA TTTCGGTAAA AATGGAACAT TGA
|
Protein sequence | MSEVMSAKPT KINLLNFNRA GLREYFSSIG EKPFRADQMM KWIYQAGVSD FDQMTNLNKA LREKLKAQCE VKAPEIAYQQ GASDGTIKFA LRLEGGQEVE TVWIPDEDRA TLCVSSQVGC ALECTFCSTA QQGFNRNLSV SEIIGQVWRV ATTIGLSNDS AKRPITNVVM MGMGEPLLNL KNVVPAMDLM LDDLAFGLSK RRVTLSTSGV VPALDMLGDQ IDVALAISLH APDDKLRDEI VPINKKYPIQ EFLAGVRRYL AKSNANQGKV TVEYVMLNGI NDSTDQAHEL AKVLADTPCK INLIPFNPYP GSPYSRSSNS RIDRFAKVLS SYGLMVVVRK TRGDDIDAAC GQLVGDVVDR TKRMLKKQMK GDEISVKMEH
|
| |