| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3127 |
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| Symbol | |
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| ID | 4174900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3768925 |
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| End bp | 3769962 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056154 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_662687 |
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| Protein GI | 109899432 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAG AAGTACAACA TATGGAAGAG TCTCAAGTAT TCGGTCCAGG ACCTGTATTG
AAGGCTGCGC GATTAGAAAA AGGCTTAACG GTAGAGCAAA TTGCTGGCCT TATCCATTTA
AAGCCGAGCT TAATTATCGC GTTAGAAAAC GATGAATACG ACCCTAGTAT CTCGATGACT
TTCATCAAGG GCTATCTTAA ATTGTATGCT CGCCAGGTTG ACGTGTCGGA AGCTCAAGTC
CTCGACGGGT TAGATAATCT GGATACCCAT AAAAAAGAAC CCGCAAAATT ACAGAGTTTC
TCCCGTCGCG TAGCTCATCA AGCTAACGAC GACAAGCTCA TGTTAGTTAC TTACCTGATT
TTGGCGATAG TTGTTGCGCT TGTGGTTGTC TGGTGGTTTC AACAGGGTGA CAACGAGACT
GCAAGTACGT TAGATACCCC CACTGTACAA AGTGAAGCAC AAAATAACGT AAAAAGTGAA
AAGCCTGTCG ATATCCAAAG TGATGTTGAA AACGACACTG CCGTTATCGC CACTGGGGAT
GTTAACGAGT CAGGTTTACG TTCTACCGAT ATGGCCCAAG AAACGACCGA ATTCCCACGC
GATGAAGTAA ACCAAAGCAA CGAGATTCAG CCTGAGGTAA GTGGCAGCCT TGAGGATAGT
AACAGTATTT TGACCCCTGA TAATGCGTCC CCTCAAGACG GTGTTGCCCC AGCGGTAACC
GTAAACAGTG AAAGTGCTTC TGCCCAACTC AACCCCCAAG TGTCCGCTAG CGCACAAACA
GAGCAAACGG GTGAATTAGT TGATGTAGTT TTCACCTTCA ACGACGATTG TTGGGTGAGC
GTTATTGATG CGACCGGAGA AACCATTGCT GTTGGAGTTA AAGTTGCGGG CCGGGTTATG
AGTATTTCTG GAGTCGCCCC CTTTGAAGTC ATTTTAGGGG CACCAAGTGT GGTGCAAATA
CGGTACGCGG ATGAAGATCT AGATATGTCA TTTTTAGCAC CAAACAGTAC CGCAAAATTT
ACTTTACCTC GGTCGTAA
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| Protein sequence | MSEEVQHMEE SQVFGPGPVL KAARLEKGLT VEQIAGLIHL KPSLIIALEN DEYDPSISMT
FIKGYLKLYA RQVDVSEAQV LDGLDNLDTH KKEPAKLQSF SRRVAHQAND DKLMLVTYLI
LAIVVALVVV WWFQQGDNET ASTLDTPTVQ SEAQNNVKSE KPVDIQSDVE NDTAVIATGD
VNESGLRSTD MAQETTEFPR DEVNQSNEIQ PEVSGSLEDS NSILTPDNAS PQDGVAPAVT
VNSESASAQL NPQVSASAQT EQTGELVDVV FTFNDDCWVS VIDATGETIA VGVKVAGRVM
SISGVAPFEV ILGAPSVVQI RYADEDLDMS FLAPNSTAKF TLPRS
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