| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3123 |
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| Symbol | |
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| ID | 4174896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3764403 |
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| End bp | 3765650 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056150 |
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| Product | outer membrane protein assembly complex subunit YfgL |
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| Protein accession | YP_662683 |
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| Protein GI | 109899428 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.126817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAGG ATTTAAACGT GAAAAAAGCA TTACTGCCCT TAATTTTGAT TAGTACCTTT
GGTTTATCAG CTTGTAGCAC AATTTCAGGA TGGTTTACCG ATGATGAAGA GTTAGAAATC
CGTATCCTTA AGCCGATTGA TTCTGAGTTC ACCCCTACAA CATTATGGGA TACCGAGTTG
GGTGATGGCA TAGACCATTA CTTTTCTCGT CTAAAGCCTG CTGTTGCCTA TGACATGGTA
TTCGCTGCAA ATCGCCAAGG CAAAGTGGCT GCGTATAACA AGGAAACCGG TAACGAGATC
TGGACGAAAA ACTACGCCGT CTACAATCAT GAAGGTTTTA CGTCTAGTAT TACCAATTTG
TGGTCAAGTG GCGCTTCTGC AAAAATCGCA GGTGGCTTAG CGGTTGCCTA TGAAACCCTG
TTTTTTGGTA CAGAGAACGG CGATGTGAAA GCCCTTGATG TGCATACAGG CGAAGAAAAA
TGGTCTGTTA CGGTCAAAGG CGAAGTATTA GCGGCTCCCG CGATTGATGA AGGTGTTGTT
GTTATTAATA CTGGCTCCGG CACCATGTTT GGTTTAGACG CCGAGTCAGG CGAACAGATA
TGGTCTTATG AGTCTGACGT TCCTCCTCTA TCTTTACGTG GTATTGCAGC GCCAGTGGCG
GCAAATGGTG GCGCCATTGT AGGGACAGCG TCTGGTAAAT TAGCGGTGAA CATTTTAGGT
ACAGGGCAAA CCGCATGGGA GCAACCCATA GGCTCTGCAA CAGGTGCGAC TGAGCTTGAC
CGCATTGTAG ATATCGACAG CAAACCATTA GTGGCTGGCG GCGTTATTTA TGTTATTTCT
TTCGATGGTA GCTTAGCGTC AGTAGAGCTT AGAAGTGGCC GTACGATATG GAAGCGTGAA
TACAAATCTT ACCGCCGTTT AACCCAAGCC GGCAATACCT TGTTTGTAGT TGATTCAGAC
AGCAACGTGT ATGCACTCGA TGCTAGAAAT GGTATTGAGA AGTGGAGTCA AAGCGCTCTT
AAAAAGCGCT TGCTTACCGC TGCTGAACCC ATTGGTGAAT ATTTGGTTTC GGGCGACAAG
TGGGGCTTCT TACATTTCTT TAATCAAACT GACGGCAAAA TTGTCTCTCG GGTTGATGTA
GGGGGAGATG ACGAAGATGA GAGTATTTAT AGCGCCCCAG TGGTTGATGG CAATATGCTG
TATACTCAAA CTCGTGATGG CAAGTTAGTG GCTATTCAAG TGCCCTAA
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| Protein sequence | MGKDLNVKKA LLPLILISTF GLSACSTISG WFTDDEELEI RILKPIDSEF TPTTLWDTEL
GDGIDHYFSR LKPAVAYDMV FAANRQGKVA AYNKETGNEI WTKNYAVYNH EGFTSSITNL
WSSGASAKIA GGLAVAYETL FFGTENGDVK ALDVHTGEEK WSVTVKGEVL AAPAIDEGVV
VINTGSGTMF GLDAESGEQI WSYESDVPPL SLRGIAAPVA ANGGAIVGTA SGKLAVNILG
TGQTAWEQPI GSATGATELD RIVDIDSKPL VAGGVIYVIS FDGSLASVEL RSGRTIWKRE
YKSYRRLTQA GNTLFVVDSD SNVYALDARN GIEKWSQSAL KKRLLTAAEP IGEYLVSGDK
WGFLHFFNQT DGKIVSRVDV GGDDEDESIY SAPVVDGNML YTQTRDGKLV AIQVP
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