| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3119 |
|---|
| Symbol | guaA |
|---|
| ID | 4174892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 3758182 |
|---|
| End bp | 3759759 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638056146 |
|---|
| Product | GMP synthase |
|---|
| Protein accession | YP_662679 |
|---|
| Protein GI | 109899424 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit |
|---|
| TIGRFAM ID | [TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAA ACATTCACGA CCAACGCATA CTCATTCTCG ACTTCGGCTC TCAGTACACT
CAACTTATCG CTCGTAGAGT GCGCGAAATA GGCGTGTACT GTGAATTATG GGCATGGGAT
GTAACCGAAG AGCAAATTCG TGAATTTAAT CCAAACGGTA TTATTTTATC AGGTGGACCC
GAATCTGTTC ATGCAAAAGA CTCGCCGCGT GCGCCGCAAT ATGTCTTTGA TGCGGGGGTC
CCCGTATTTG GTATTTGCTA CGGCATGCAA ACCATGGCCG AACAGTTAGG CGGTGCCGTG
TTAGGCTCAG ATATGCGAGA GTTTGGTTAT GCTCAAGTGG AAGTGGTTGA GCAAATGGCA
TTACTCAATA ACATCGAAGA TCATGTTAGC CCTAATGGTA ACGCATTGCT TGATGTATGG
ATGAGTCACG GTGATAAAGT GGCGGCGGTA CCGGACGGGT TTATCACAGC AGCGAAAACC
GATAGTTGCC CATTTGCCGC GATCGTACAC CCCGAAAAGC AATTCTACGG TGTGCAGTTT
CACCCAGAAG TGACGCACAC TCGTCAGGGG CAGCGCATGT TGTCGCATTT CGTGTTAGAT
ATTTGTCAGT GCGAAAAACT CTGGACGCCT GACGCAATCA TCGAGGATGC GGTTGCGCGC
ATGAAGAAGC AAATCGGTGA TGACGAAGTT ATCTTAGGGT TGTCGGGTGG TGTTGACTCA
TCAGTTGTGG CGATGTTGCT ACACCGCGCG ATTGGCAAAA ACCTCACCTG TGTATTTGTG
GATAACGGCT TGTTACGTTT AAACGAAGGC CAACAAGTCA TGGACATGTT CGGCGATCAT
TTTGGACTTA ATATTATCAA AATTGATGCA GAAGAGCGCT TCTTATCTGC ATTGGCCGGT
ACGGATGAGC CTGAAGCAAA ACGTAAGATA ATAGGCCGTG TGTTTGTTGA AGTGTTCGAT
GAAGAATCGA AAAAGCTGAA AAATGCTAAG TGGTTGGCAC AAGGTACGAT TTATCCTGAT
GTAATCGAGT CAGCTGGCTC TGCTACCGGT AAAGCTCACG TGATTAAATC ACACCATAAC
GTTGGTGGTT TACCAGACGA TATGGCGATG GGCTTGGTTG AGCCATTGCG TGAATTGTTT
AAAGACGAAG TACGCAAAAT CGGCTTAGAG CTGGGTTTGC CTTATGACAT GTTGTATCGC
CACCCATTCC CGGGGCCGGG GTTAGGTGTT CGGGTGTTAG GTGAAGTGAA AAAAGAATAC
TGTGACTTGT TGCGCCGCGC TGATGCCATC TTTATCGATG AGCTACATAA GCATGATTTG
TATAATAAGG TAAGCCAAGC CTTTACGGTT TTCCTACCTG TGAAGTCAGT AGGCGTCATG
GGCGATGCAC GTAAATACGA TTGGGTCGTA TCATTGCGTG CAGTAGAGAC GATTGATTTT
ATGACCGCGC ATTGGGCCCA TTTACCTTAC GAATTTTTGG GTAAAGTTTC CAACCGCATT
ATCAACGAAA TAGATGGTAT CTCGCGAGTG GTATACGACA TTTCAGGTAA GCCACCCGCC
ACTATTGAGT GGGAATAG
|
|---|
| Protein sequence | MTTNIHDQRI LILDFGSQYT QLIARRVREI GVYCELWAWD VTEEQIREFN PNGIILSGGP
ESVHAKDSPR APQYVFDAGV PVFGICYGMQ TMAEQLGGAV LGSDMREFGY AQVEVVEQMA
LLNNIEDHVS PNGNALLDVW MSHGDKVAAV PDGFITAAKT DSCPFAAIVH PEKQFYGVQF
HPEVTHTRQG QRMLSHFVLD ICQCEKLWTP DAIIEDAVAR MKKQIGDDEV ILGLSGGVDS
SVVAMLLHRA IGKNLTCVFV DNGLLRLNEG QQVMDMFGDH FGLNIIKIDA EERFLSALAG
TDEPEAKRKI IGRVFVEVFD EESKKLKNAK WLAQGTIYPD VIESAGSATG KAHVIKSHHN
VGGLPDDMAM GLVEPLRELF KDEVRKIGLE LGLPYDMLYR HPFPGPGLGV RVLGEVKKEY
CDLLRRADAI FIDELHKHDL YNKVSQAFTV FLPVKSVGVM GDARKYDWVV SLRAVETIDF
MTAHWAHLPY EFLGKVSNRI INEIDGISRV VYDISGKPPA TIEWE
|
|---|
| |