| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3115 |
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| Symbol | |
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| ID | 4174888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3755301 |
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| End bp | 3755789 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056142 |
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| Product | CMP/dCMP deaminase, zinc-binding |
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| Protein accession | YP_662675 |
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| Protein GI | 109899420 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0590] Cytosine/adenosine deaminases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTTTAG AACAAGATCA ACTTTGGATG CGACACGCGC TAAGTCTTGC AAGTAAAGCA
GCACAGGCAG GAGAGATCCC CGTAGGGGCC GTGTTGGTTA AAGATCAGAA AATCGTTGGG
GAAGGTTGGA ATCAGTCCAT CACGCTCAAC GACCCATCAG CTCATGCAGA GATGCTGGCG
ATACGGCAAG CTGGCATCAA TGTTAAAAAC TATCGATTAA TAGATACCAC CCTATATGTG
ACGCTAGAAC CATGCACTAT GTGTGCGGGT TTATTAGTGC ACAGTCGCAT TAAGCGTTTA
GTGTTTGGTG CTTATGATGC TAAGACGGGT GCCGCGGGTA GTATCATGGA TGTGCTTAAC
GATACGCGTT TAAACCATCA AGTAGAGGTA GTAGGTGGTG TTTTAGGTGA GGAGTGCGGT
GAAACAATAT CGGCTTTTTT TCGTCAGCGC CGTGCGCAAA TCAAAGCCAA CAAACAAAAA
AAGGCTTAG
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| Protein sequence | MSLEQDQLWM RHALSLASKA AQAGEIPVGA VLVKDQKIVG EGWNQSITLN DPSAHAEMLA
IRQAGINVKN YRLIDTTLYV TLEPCTMCAG LLVHSRIKRL VFGAYDAKTG AAGSIMDVLN
DTRLNHQVEV VGGVLGEECG ETISAFFRQR RAQIKANKQK KA
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