| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3113 |
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| Symbol | |
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| ID | 4174886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3748949 |
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| End bp | 3752836 |
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| Gene Length | 3888 bp |
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| Protein Length | 1295 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056140 |
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| Product | phosphoribosylformylglycinamidine synthase |
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| Protein accession | YP_662673 |
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| Protein GI | 109899418 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
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| TIGRFAM ID | [TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGTCC TTCGCGGCGC TCCAGCCCTT TCTGAATTTC GTACTAAAAA ACTCATGCAG
TCAATTGAGG CCCTCAACTT ACCTGTTCAC GCTTTGTTTG CTGAATTTGT GCATTTTGCT
CAAGTCAGTG CGCAGCTAGA AGCGAACGAC CAGCAGGTAT TGGATAAACT TCTGACCTAC
GGCCCCAAAA TTCAAGAGAA ACAGCATAAA GGGCTGCTGT TATTGGTCAT ACCGCGAGCA
GGAACGATTT CCCCTTGGTC ATCAAAAGCC ACCGATATCG CGCACAATTG TGGCCTTAAT
AACGTTGAGC GTTTAGAACG AGGCTGCGCA TTTTACATAG ATGCTGACCC ACTAAATGAC
ACTCAACTTA TTCAGCTAAA GAATGTACTG CATGATCGCA TGACCCAAAG CGTGGTCAGC
GATTTACAAG ACGCGAGTAT CTTGTTTAAG CACGAAGCAC CGAAGCCGTT AACGTCTATC
GATGTGTTAG GCGGAGGGCG TGAAGAGTTA GTCAGTGCCA ATGTGCGATT GGGCTTGGCT
TTAGCCGAAG ATGAAGTGGA TTATTTGGTT AGCAGTTTCG AAAAGTTGGG GCGTAACCCT
AACGACATCG AACTCTACAT GTTTGCTCAG GCAAACTCAG AACATTGCCG CCATAAAATT
TTTAACGCTG ATTGGACGAT CGATGGGCAG ACGCAGCCTA AATCATTGTT CAAAATGATT
AAGAATACCT ACGAAAAGTG TCCAGACTAT GTGCATTCTG CTTACGCGGA TAATGCCGCA
GTAATGGAAG GCAGTTTCGC AGGGCGTTTC TTCCCGCAAG CAGACAACAA CCAGTATCGC
TATCACCATG AAGACATCGA TATTCTGATG AAAGTCGAGA CCCATAACCA CCCAACTGCT
ATTGCCCCTT TCAGTGGTGC GGCAACAGGC TCTGGTGGTG AAATTCGAGA TGAAGGTGCT
ACAGGTCGCG GCTCTAAACC GAAAGCAGGT TTAGTCGGGT TTTCTGTATC TAACTTGCGT
ATTCCAGGGT TTGAGCAACC TTGGGAGAAC GATTATGGCA AGCCAGAGCG CATCGTGACG
GCCTTCGATA TTATGCTAAA TGGCCCACTG GGCGGCGCAG CTTTCAACAA CGAGTTTGGT
CGCCCGAATA TTCTTGGCTA TTTCCGTACC TACGAGCAAA AAGTGACCAG CTTTAATGGG
GAAGAAGTGC GCGGTTATCA CAAACCCATC ATGTTGGCGG GTGGGTTAGG CAATATTCGT
AAGCAACATA CTCAAAAAGG TGAAATCACC GTTGGGGCCA AGCTTATCGC TCTGGGTGGC
CCGGCCATGA ACATTGGTCT AGGCGGCGGG GCAGCATCGT CAATGGCATC GGGTGAGTCT
AATGAAGATT TAGACTTTGC CTCGGTACAA CGTGACAACC CTGAAATGGA GCGACGTTGT
CAGGAAGTAA TCGACAAATG TTGGCAACTA GGCGAAAACA ATCCAATTCA GTTTATTCAC
GATGTGGGCG CCGGTGGTTT ATCCAATGCT TTCCCTGAAT TGGTTAACGA CGGTGGGCGT
GGTGCAGTCT TTTCATTGCG AAACGTACCT AACGATGAAC CCGGTATGAC CCCGCTAGAG
GTATGGTGTA ACGAGTCGCA AGAACGTTAT GTGATGTCAG TGGCCCCTGA AAATTTAGCC
ACCTTTACCG ATATTTGTGC CCGCGAACGT GCGCCGTTTG CAGTGGTCGG TGAGGCGACA
CAAGCCCGCC ACTTGACCTT GGATGACAGC CATTTCAATA ACAAACCGAT TGATATGCCC
CTTGATGTCT TGCTTGGTAA AGCGCCTAAA ATGCATCGTG ATGTACAATC AAAAGCGCTG
ACGGGCAACG CATTTGATGT TAGCAATATC GATTTAGATG AAGCCGCACT GCGCCTGTTA
CATTTGCCCG CGGTGGCAGA GAAAACCTTT TTGATCACCA TAGGCGATCG TTCGGTAACG
GGCTTGGTCA ATCGTGACCA AATGGTCGGC CCTTGGCAAA TCCCTGTGGC CGATGTCGCC
GTCACTGCTG CTGCTTTTGA TACATATCAA GGTGAGGCGA TGTCTTTAGG CGAGCGCACA
CCGGCTGCAT TATTAAACTA TGGTGCATCT GCGCGATTAG CGGTGGGCGA AGCCTTGACC
AACATTGCCG CTGCCGATAT TGGCGACCTA AAACGGATTA AATTATCAGC TAACTGGATG
GCTGCAGCCG GTCATCCAGG GGAAGATGCG GGCCTTTACG AAGCGGTCAA AGCGGTTGGT
GAAGAGTTAT GCCCAGCCCT AGGATTAACT ATTCCAGTGG GTAAAGACTC TATGTCTATG
AAAACCCAGT GGCAAGATGC GCAAGGTGAT AAGGCAGTTA CTTCGCCCAT GTCATTGGTG
ATCACCGCTT TTGGTGCGGT GAAGGATGTG CGTAAAACCT TGACCCCAGA ATTGACAACA
AAAGGCGATA CGTGCCTGAT GTTAATCGAT TTAGGGGCAG GTCAAAATCG TATGGGGGCA
TCCTGTTTAG CGCAGGTTTA TCAACAGTTG GGCGATAAAA CACCAGATGT CGATTCCCCT
GAGTTGCTCA AAGGTTTCTT TTTAGCGATT CAACAGTTGG TGAATGAAAA AGCATTACAT
GCTTATCATG ACCGCTCTGA CGGTGGTTTG TTTACGACCT TAGTGGAAAT GGCGTTTGCC
GGTAATACAG GCTTAGATAT TAAGCTAGAC GCATTAACCG GTGACAATGC TAGCGCCTTG
TTTAACGAAG AATTAGGTGC GGTTATTCAG TTTGATGCAG ATAAACTGAA TCAAGTCGAC
GCAATATTAG CTGCCAATGG CCTATCGGGC GTGAGTCATG TGATTGGAAC GTTATCCGAT
GATGATCAAA TCCGTTTTTC TCGCGAAGGT GAGCCTGTGC TACAAAATAG TCGCGGGGTG
TATCGCAACG CATGGGCGCA AACTACGCAT CATATGCAGC GTTTGCGTGA CAACCCAGAA
TGCGCAGAGC AAGAACTGGC GAGCAAAAAC GATCTGAATA ACCCTGGTTT GCATGCTGCA
CTTTCTTTCG ATGTCACTGA AGATGTTGCG GCGCCGTATA TCGCAAAAGG TATCGCCCCT
AAAATGGCGA TATTGCGTGA ACAGGGCGTG AACTCACATG TTGAGATGGC TGCTGCATTT
GACCGCGCAG GCTTTGCTTC AGTGGATGTG CACATGAGTG ACATACTCGC CGGTAGGGTG
TCGCTTAGTG AATTCCAAGG TTTAGTGGCC TGTGGTGGAT TTTCTTATGG TGATGTACTA
GGTGCTGGTG AAGGTTGGGC TAAGTCAATT TTGTTCAACG CCATGGCGCG TGATGAATTC
TCAGCGTTCT TCGAGCGTAA CGAAACCTTT AGCCTTGGTG TGTGTAATGG CTGTCAGATG
TTATCAAATC TTAAGTCGCT AATCCCTGGG GCTGAACATT GGCCGCATTT CGTGACTAAC
CAATCCGAGC GTTTTGAAGC CCGTGTTGCC ATGCTCGAGG TGAAAGACTC CCCGTCGATA
TTCTTTAAAG GCATGCAAGG TTCAAAAATG CCAATTGCGG TATCCCATGG CGAAGGGCGT
GCTGAATTTG CTCAAACTAC TGGCTTAGAA GCTGCGCTAG ATAGCAATAC TATTGCCCTG
CAATATGTTG ATAACTACGG CAAGGTTACT GAGCAATATC CAGCAAACCC GAATGGCTCT
CCTGCGGGAA TTTCAGGTTT AACTTCAAAG GATGGGCGCG CAACCATCAT GATGCCGCAT
CCTGAACGTG TGTTTAGAAC GGTGGCAAAC TCTTGGCATC CGGACGATTG GCAAGAAGAT
AGCCCGTGGA TGCGAATGTT TAGAAACGCC CGTGTTTATT TGGGATAA
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| Protein sequence | MLVLRGAPAL SEFRTKKLMQ SIEALNLPVH ALFAEFVHFA QVSAQLEAND QQVLDKLLTY
GPKIQEKQHK GLLLLVIPRA GTISPWSSKA TDIAHNCGLN NVERLERGCA FYIDADPLND
TQLIQLKNVL HDRMTQSVVS DLQDASILFK HEAPKPLTSI DVLGGGREEL VSANVRLGLA
LAEDEVDYLV SSFEKLGRNP NDIELYMFAQ ANSEHCRHKI FNADWTIDGQ TQPKSLFKMI
KNTYEKCPDY VHSAYADNAA VMEGSFAGRF FPQADNNQYR YHHEDIDILM KVETHNHPTA
IAPFSGAATG SGGEIRDEGA TGRGSKPKAG LVGFSVSNLR IPGFEQPWEN DYGKPERIVT
AFDIMLNGPL GGAAFNNEFG RPNILGYFRT YEQKVTSFNG EEVRGYHKPI MLAGGLGNIR
KQHTQKGEIT VGAKLIALGG PAMNIGLGGG AASSMASGES NEDLDFASVQ RDNPEMERRC
QEVIDKCWQL GENNPIQFIH DVGAGGLSNA FPELVNDGGR GAVFSLRNVP NDEPGMTPLE
VWCNESQERY VMSVAPENLA TFTDICARER APFAVVGEAT QARHLTLDDS HFNNKPIDMP
LDVLLGKAPK MHRDVQSKAL TGNAFDVSNI DLDEAALRLL HLPAVAEKTF LITIGDRSVT
GLVNRDQMVG PWQIPVADVA VTAAAFDTYQ GEAMSLGERT PAALLNYGAS ARLAVGEALT
NIAAADIGDL KRIKLSANWM AAAGHPGEDA GLYEAVKAVG EELCPALGLT IPVGKDSMSM
KTQWQDAQGD KAVTSPMSLV ITAFGAVKDV RKTLTPELTT KGDTCLMLID LGAGQNRMGA
SCLAQVYQQL GDKTPDVDSP ELLKGFFLAI QQLVNEKALH AYHDRSDGGL FTTLVEMAFA
GNTGLDIKLD ALTGDNASAL FNEELGAVIQ FDADKLNQVD AILAANGLSG VSHVIGTLSD
DDQIRFSREG EPVLQNSRGV YRNAWAQTTH HMQRLRDNPE CAEQELASKN DLNNPGLHAA
LSFDVTEDVA APYIAKGIAP KMAILREQGV NSHVEMAAAF DRAGFASVDV HMSDILAGRV
SLSEFQGLVA CGGFSYGDVL GAGEGWAKSI LFNAMARDEF SAFFERNETF SLGVCNGCQM
LSNLKSLIPG AEHWPHFVTN QSERFEARVA MLEVKDSPSI FFKGMQGSKM PIAVSHGEGR
AEFAQTTGLE AALDSNTIAL QYVDNYGKVT EQYPANPNGS PAGISGLTSK DGRATIMMPH
PERVFRTVAN SWHPDDWQED SPWMRMFRNA RVYLG
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