Gene Patl_3111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3111 
Symbol 
ID4174884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3745648 
End bp3747549 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content45% 
IMG OID638056138 
Productpeptidase M1, membrane alanine aminopeptidase 
Protein accessionYP_662671 
Protein GI109899416 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0308] Aminopeptidase N 
TIGRFAM ID[TIGR02411] leukotriene A-4 hydrolase/aminopeptidase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCAG CCATTTTAGC GACAACCATA TCTGCCATTT TTGCATTAGG CGGATGTGCC 
GGACAAGGCA ACACTAACCA AACCAGTCAT CCTGCATCGT CGGATACTTT GACCAACGCC
GCAGTGAATA TTGAATCAGG TAAAGACTAC CATTCATTTT CAAACCCAGA GCAAATCAGT
GTGACCCACT TAGCATTAGA CTTGGATGTT AACTTTGATA AAAAAGTTAT CACAGGCGAT
GTGGAGTTAA CGGTAAAACG TATGCAAGAA GGCAACAACA CGCTGGTCTT AGATACGCGA
GATTTAACCA TTAAAGGGGT AACAGCAAAC GGCATGCCGG TGCCTTACTT TTTAGGGAAA
GAAGATTCTT TTTTAGGCGC TCCTCTGTCT ATCACCGTGC CTGAAGGCGT CGATAAAGTC
ACAGTTTCAT ATCAAACCTC ACCACAAGCA TCAGGTGTAC AATGGCTAAC ACCTGCGCAA
ACAGCAGGTA AGCAGCATCC GTTCTTGTTT ACTCAGTCTC AAGCGATTCA TGCGCGTAGC
TTTATGCCAT TACAAGACTC ACCTCAGGTG CGTGTTACTT ACAGCGCAAC TGTGCATACA
CCAAAAGAGC TGCTAGCGGT GATGAGCGCT TCGAATGACC CAGATACTGT TCGTGACGGT
GTATACGAGT TTGATATGCC CCAGCCAATC CCAGCCTATT TGATTGCGTT GGCAGTGGGG
GATTTAAAAT TTAAACCTAT GGGTAAGCGC ACCGGTGTAT ATGCGGAGCC GGCGTTACTT
GATGCAGCAG CTGACGAATT TGCTGACACG GAATCCATGC TTGAGGTGAC CGAAAAGACG
TACGGGCCTT ACCGCTGGGA TCGTTACGAC TTATTAATAT TGCCGCCTTC TTTCCCGTTT
GGTGGCATGG AAAATCCCCG CTTGTCGTTC ATAACGCCAA CGGTGATTGC AGGTGATAAA
AGCCTAGTGT CATTGATTGC GCATGAATTA GCACATTCAT GGTCTGGCAA CACAGTCACA
AATGCGACGT GGCGTGACCT ATGGTTGAAC GAAGGATTCA CTACGTATTT AACTTACCGC
ATCATGCAAA TGGTGTATGG CGATGATAGA TACAACATGG AAGCAGTATT AGGCCGCCAA
GATTTACAAG CCGATATTGA TAGCTTACCT GCAGATGATC AAATACTTGC TATCGATCTT
CGAGGACGAG ATCCCGATGC GGTGTTTAGC AATATTCCTT ATGAAAAAGG CGCGTTGTTT
TTAAGGGAGT TAGAGCAAAA AGTCGGACGC GATAATTTTG ATCAATTTTT ACTAAATTAT
TTCGAACATT TCGCGTTTCA AAGTATCACC ACAGATCAGT TCATGGCCTA TTTGAACGAT
ACGTTGTTAA AAGACTACGC TGATAAATTG TCACCGGAAC GTATTCATCA ATGGATATTC
GAACCGGGGA TCCCGCAAGG CGCACCTGTG CCACATTCAA ATGCGTTTAA AATTGTCGAT
GATGCCCGCA ATCAGTGGCT CAGTGGCGAG TTAAAAGCCA AAGATATTGA CGCAAAGAAT
TGGGTTGTTC ATCAGTGGCT GTATTTTTTG AACAACATGC CTGACACGCT TAGCCAAAAT
AAATTAGCTG AATTAGATGC GGCATTTGAT TTAACCCAAA GTAAGAACAA TGAGATTGCC
CATAGCTGGT TGTTAATGGC CGTGGAAAAT TGGTATGAAC CAGCACTGCC TCGGGTGCAT
AGTTATTTAG TGAGTATTGG CCGTAACAAG CTGGTGAAAC CGATTTATAA GGCACTGTCG
CAAACGCCTA AAGGTAAAGT GTTGGCGAAA AAAGCCTTCG CAGAAGCTAA ACCTGGTTAT
CATCCGTTAA CGGTAAAAGC CAATGAGGGT TTTGTTGAAT AG
 
Protein sequence
MKSAILATTI SAIFALGGCA GQGNTNQTSH PASSDTLTNA AVNIESGKDY HSFSNPEQIS 
VTHLALDLDV NFDKKVITGD VELTVKRMQE GNNTLVLDTR DLTIKGVTAN GMPVPYFLGK
EDSFLGAPLS ITVPEGVDKV TVSYQTSPQA SGVQWLTPAQ TAGKQHPFLF TQSQAIHARS
FMPLQDSPQV RVTYSATVHT PKELLAVMSA SNDPDTVRDG VYEFDMPQPI PAYLIALAVG
DLKFKPMGKR TGVYAEPALL DAAADEFADT ESMLEVTEKT YGPYRWDRYD LLILPPSFPF
GGMENPRLSF ITPTVIAGDK SLVSLIAHEL AHSWSGNTVT NATWRDLWLN EGFTTYLTYR
IMQMVYGDDR YNMEAVLGRQ DLQADIDSLP ADDQILAIDL RGRDPDAVFS NIPYEKGALF
LRELEQKVGR DNFDQFLLNY FEHFAFQSIT TDQFMAYLND TLLKDYADKL SPERIHQWIF
EPGIPQGAPV PHSNAFKIVD DARNQWLSGE LKAKDIDAKN WVVHQWLYFL NNMPDTLSQN
KLAELDAAFD LTQSKNNEIA HSWLLMAVEN WYEPALPRVH SYLVSIGRNK LVKPIYKALS
QTPKGKVLAK KAFAEAKPGY HPLTVKANEG FVE