Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3111 |
Symbol | |
ID | 4174884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3745648 |
End bp | 3747549 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056138 |
Product | peptidase M1, membrane alanine aminopeptidase |
Protein accession | YP_662671 |
Protein GI | 109899416 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0308] Aminopeptidase N |
TIGRFAM ID | [TIGR02411] leukotriene A-4 hydrolase/aminopeptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTCAG CCATTTTAGC GACAACCATA TCTGCCATTT TTGCATTAGG CGGATGTGCC GGACAAGGCA ACACTAACCA AACCAGTCAT CCTGCATCGT CGGATACTTT GACCAACGCC GCAGTGAATA TTGAATCAGG TAAAGACTAC CATTCATTTT CAAACCCAGA GCAAATCAGT GTGACCCACT TAGCATTAGA CTTGGATGTT AACTTTGATA AAAAAGTTAT CACAGGCGAT GTGGAGTTAA CGGTAAAACG TATGCAAGAA GGCAACAACA CGCTGGTCTT AGATACGCGA GATTTAACCA TTAAAGGGGT AACAGCAAAC GGCATGCCGG TGCCTTACTT TTTAGGGAAA GAAGATTCTT TTTTAGGCGC TCCTCTGTCT ATCACCGTGC CTGAAGGCGT CGATAAAGTC ACAGTTTCAT ATCAAACCTC ACCACAAGCA TCAGGTGTAC AATGGCTAAC ACCTGCGCAA ACAGCAGGTA AGCAGCATCC GTTCTTGTTT ACTCAGTCTC AAGCGATTCA TGCGCGTAGC TTTATGCCAT TACAAGACTC ACCTCAGGTG CGTGTTACTT ACAGCGCAAC TGTGCATACA CCAAAAGAGC TGCTAGCGGT GATGAGCGCT TCGAATGACC CAGATACTGT TCGTGACGGT GTATACGAGT TTGATATGCC CCAGCCAATC CCAGCCTATT TGATTGCGTT GGCAGTGGGG GATTTAAAAT TTAAACCTAT GGGTAAGCGC ACCGGTGTAT ATGCGGAGCC GGCGTTACTT GATGCAGCAG CTGACGAATT TGCTGACACG GAATCCATGC TTGAGGTGAC CGAAAAGACG TACGGGCCTT ACCGCTGGGA TCGTTACGAC TTATTAATAT TGCCGCCTTC TTTCCCGTTT GGTGGCATGG AAAATCCCCG CTTGTCGTTC ATAACGCCAA CGGTGATTGC AGGTGATAAA AGCCTAGTGT CATTGATTGC GCATGAATTA GCACATTCAT GGTCTGGCAA CACAGTCACA AATGCGACGT GGCGTGACCT ATGGTTGAAC GAAGGATTCA CTACGTATTT AACTTACCGC ATCATGCAAA TGGTGTATGG CGATGATAGA TACAACATGG AAGCAGTATT AGGCCGCCAA GATTTACAAG CCGATATTGA TAGCTTACCT GCAGATGATC AAATACTTGC TATCGATCTT CGAGGACGAG ATCCCGATGC GGTGTTTAGC AATATTCCTT ATGAAAAAGG CGCGTTGTTT TTAAGGGAGT TAGAGCAAAA AGTCGGACGC GATAATTTTG ATCAATTTTT ACTAAATTAT TTCGAACATT TCGCGTTTCA AAGTATCACC ACAGATCAGT TCATGGCCTA TTTGAACGAT ACGTTGTTAA AAGACTACGC TGATAAATTG TCACCGGAAC GTATTCATCA ATGGATATTC GAACCGGGGA TCCCGCAAGG CGCACCTGTG CCACATTCAA ATGCGTTTAA AATTGTCGAT GATGCCCGCA ATCAGTGGCT CAGTGGCGAG TTAAAAGCCA AAGATATTGA CGCAAAGAAT TGGGTTGTTC ATCAGTGGCT GTATTTTTTG AACAACATGC CTGACACGCT TAGCCAAAAT AAATTAGCTG AATTAGATGC GGCATTTGAT TTAACCCAAA GTAAGAACAA TGAGATTGCC CATAGCTGGT TGTTAATGGC CGTGGAAAAT TGGTATGAAC CAGCACTGCC TCGGGTGCAT AGTTATTTAG TGAGTATTGG CCGTAACAAG CTGGTGAAAC CGATTTATAA GGCACTGTCG CAAACGCCTA AAGGTAAAGT GTTGGCGAAA AAAGCCTTCG CAGAAGCTAA ACCTGGTTAT CATCCGTTAA CGGTAAAAGC CAATGAGGGT TTTGTTGAAT AG
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Protein sequence | MKSAILATTI SAIFALGGCA GQGNTNQTSH PASSDTLTNA AVNIESGKDY HSFSNPEQIS VTHLALDLDV NFDKKVITGD VELTVKRMQE GNNTLVLDTR DLTIKGVTAN GMPVPYFLGK EDSFLGAPLS ITVPEGVDKV TVSYQTSPQA SGVQWLTPAQ TAGKQHPFLF TQSQAIHARS FMPLQDSPQV RVTYSATVHT PKELLAVMSA SNDPDTVRDG VYEFDMPQPI PAYLIALAVG DLKFKPMGKR TGVYAEPALL DAAADEFADT ESMLEVTEKT YGPYRWDRYD LLILPPSFPF GGMENPRLSF ITPTVIAGDK SLVSLIAHEL AHSWSGNTVT NATWRDLWLN EGFTTYLTYR IMQMVYGDDR YNMEAVLGRQ DLQADIDSLP ADDQILAIDL RGRDPDAVFS NIPYEKGALF LRELEQKVGR DNFDQFLLNY FEHFAFQSIT TDQFMAYLND TLLKDYADKL SPERIHQWIF EPGIPQGAPV PHSNAFKIVD DARNQWLSGE LKAKDIDAKN WVVHQWLYFL NNMPDTLSQN KLAELDAAFD LTQSKNNEIA HSWLLMAVEN WYEPALPRVH SYLVSIGRNK LVKPIYKALS QTPKGKVLAK KAFAEAKPGY HPLTVKANEG FVE
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