| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3108 |
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| Symbol | |
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| ID | 4174881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3740624 |
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| End bp | 3741580 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056135 |
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| Product | hypothetical protein |
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| Protein accession | YP_662668 |
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| Protein GI | 109899413 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3591] V8-like Glu-specific endopeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0133879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAATG GAAATGAAAA AGATGTTGAA TCCCCCTTAG CCTACGATCA AGTGGCTAAA
TTTTTTGCTA GAAGTTCGAA AGGTAAAATT CCCAAGGAGC TGCAGTCGAT GCTCCTGCCT
GAGTTAAAGA GTTACAAACT GAAGAGCGTC GAGCATAAAA GTATCCAAGA TGCTGACAAT
AAACCAACCA TCCCAATGAT ACCTAAGTGG TTCGGCACCA GCCCAAAGCC TTGCAAAGCA
AAGCTAGCTA AGCCCACGCG GGTATCTCTC AATGGCAAAG ACTTATCGCC ATTAACGGTT
TTTAACGCAG AAGACCGCAG AATATACAAT GACACGAGCT ATCCATGGGG AACCATTTGT
AAAGTCGTCA CTTCATCTGG GAGTGGGTCT GGCGTTATTG TAGGTCCTCG CCATGTGTTA
ACGGCAAGTC ACGTAGTTGA TTGGAGTTCA AATGGGGCTG GCACGGTTGA AGTACATAGG
TCTGCCGGCT CTCTTAGAGC AAGCACATCT ATATCAAGAG TTTGGTTTTA CACCAAAATT
ACTGGACGTA CTGTCAGTTG GTTTGAGGTT GATGAAGATT ATGCCGTGTT AGTGACGAGT
GATAGGATCG GTGATTTATT TGGTTGGATG GGAACTCGGA CATACAACAG TTCATGGGAT
GGCGAACCCT ATTGGTTCAA CATCGGTTAT CCTGGAAGTA TAGGCGGTGC ATTGCGCCCA
ACTTATCAAA GGGATAAGAA ACTTGATGAG CCTTGGTATG ATCTCGGCCC AGGTAGATCG
ATGAGCACCC ACGCGGATTT AACACCTGGT AACTCGGGTG GGCCTATGTT TGCATTTTGG
AACGATGGGC CATATGTCGT TGCCGTTGCA TCAGCGGAAG CATCTGATGA AAACTGGTGC
TCGGGAGGTT CTTGGATGAC AAATCTCGTG CGTCACGCTA GAGAACAAGA CGCATAA
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| Protein sequence | MTNGNEKDVE SPLAYDQVAK FFARSSKGKI PKELQSMLLP ELKSYKLKSV EHKSIQDADN
KPTIPMIPKW FGTSPKPCKA KLAKPTRVSL NGKDLSPLTV FNAEDRRIYN DTSYPWGTIC
KVVTSSGSGS GVIVGPRHVL TASHVVDWSS NGAGTVEVHR SAGSLRASTS ISRVWFYTKI
TGRTVSWFEV DEDYAVLVTS DRIGDLFGWM GTRTYNSSWD GEPYWFNIGY PGSIGGALRP
TYQRDKKLDE PWYDLGPGRS MSTHADLTPG NSGGPMFAFW NDGPYVVAVA SAEASDENWC
SGGSWMTNLV RHAREQDA
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