| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3103 |
|---|
| Symbol | flgA |
|---|
| ID | 4174875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 3736403 |
|---|
| End bp | 3737113 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638056129 |
|---|
| Product | flagellar basal body P-ring biosynthesis protein FlgA |
|---|
| Protein accession | YP_662663 |
|---|
| Protein GI | 109899408 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.292219 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATA ACGTTATTTA TAAGGTGTTT GCCGCCATTA CCATACTGCC GTTCATTCAT
ACTGCAGGCT TTGCGAGTAC AAATACCCAT AAAGCACGTT CAGCACAACT GATTGAAGGC
GCTGAACAGT ATGTATCGTC CCAAATCAGT TCATCGGCTA ATACCCAGCT TAACATTAGC
ACTGCCGACA TTGATCAAAG AGTAAACTTG CCATCGTGCC CCACTCCAAT TGTATACAGT
GCCAGTTTGG AATCACTCCA ACAGAGCAAT GTAGCGGTGA AAGCGCTGTG CAGTTCAACC
AATTGGTACA TGTATTTGAT GGTCAATGTG AAACAAATGC AGCCGGTTGT GGTTATTTCT
AACGCTGTCA GCCCTGGCAC TATATTGAAT CAAAGTAACA TCGAGCTAAT CAACATGAAC
CGTGCGCTTC TTAGACGCAC TACTTTTTCA AATGTGGATG ATGTGATGGG TGCACGCATC
AAACGTCGCG TTAGACCCGG GCAACCCATT ACACCTAATA ATTTATGTTT CGTGTGTAAG
GGTGATACAA TTATCATCAA TGCTTCAAAT TCAATGATGC AAGTTAAAGC AACGGGCGTA
GCGATGCAAG ATGGCAATAT TGGTGACACC ATAAGCGTGA CGAATAGCCG TTCGAAAAAG
CAAATCAATG CACGCGTTGC GAGTACCAGT GAAGTCGTTG TCGGCATATA A
|
|---|
| Protein sequence | MNNNVIYKVF AAITILPFIH TAGFASTNTH KARSAQLIEG AEQYVSSQIS SSANTQLNIS
TADIDQRVNL PSCPTPIVYS ASLESLQQSN VAVKALCSST NWYMYLMVNV KQMQPVVVIS
NAVSPGTILN QSNIELINMN RALLRRTTFS NVDDVMGARI KRRVRPGQPI TPNNLCFVCK
GDTIIINASN SMMQVKATGV AMQDGNIGDT ISVTNSRSKK QINARVASTS EVVVGI
|
|---|
| |