| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3097 |
|---|
| Symbol | flgE |
|---|
| ID | 4174869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 3731448 |
|---|
| End bp | 3732824 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638056123 |
|---|
| Product | flagellar hook protein FlgE |
|---|
| Protein accession | YP_662657 |
|---|
| Protein GI | 109899402 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1749] Flagellar hook protein FlgE |
|---|
| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.737452 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTTA ATATTGCATT GAGTGGCGTT TCCGCTGCGC AAAGAGACTT AGATACAACG
GCAAACAACA TTGCTAACGT GAATACGGTT GGTTTTAAAG AATCCCGAGC AGAGTTTGGC
GATGTATATG CATCATCACT GTTAGCGGGT GGTAAAACTA AGGTAGGTGA CGGCGTAATT
ACCCAGGAAG TCGCTCAGCA ATTTTCCCAA GGTAGTCTGC AGTTTACTAA TAACTCACTT
GATTTAGCGG TGACAGGCAA TGGCTTCTTT GCCACCATCC CAGAAATTGA CTCTCGAGAG
TTTTCATTTA CGCGAGCTGG TATGTTCAAG CTGGATGCTG AAAACTTTGT AGTCAACTCC
AATGGTGATA ACTTGCTTGG TTTCCCTGTG AACCCTGATG GGACATCATC TTCAGTAGCA
TTAAGTACAA CCCAAGCTGT TCGTATCCCT GACTCATCAG GCTCTCCGCA GCCCACCTCC
GAAGTATCAT TAAAGATGAA TTTACCCGCA GGGGATGATG CTGTCGATTT AGATTTATTT
AATCCTGACG ATCCACTGAC TTATAACGCG GCAACTTCAG TGACTGTGTT CGACTCATTG
GGTGATAGTC ATGTTATGAC TTACTACTTC ATGAAGGATC AAGCTGCCAC CAATGAGTGG
GTGGTTACTA CTTATATGGA TGATATTGCA TTAAATACCG AAGGCGATAC GCCAGGCGTT
CCACCTATTA CTGGGCCAAA TGTAGTCGGA GAAACCACTG GCTCCCCGGT CGCTGGATAT
AGAATGACCT TTAGCGCTGG TGGTGATTTT ACCAGTATTG CCAATGCCGA TGGCACGAGT
AGTGCTACGG GCGATATCAC CTCTGTCGCA TTAGGCGGAA CAATTTTAGC TAATGGTTCT
GACCCTTCGC AAACCATCAC CACTAATTTT GCTTTCGACC CAGGTAATGC TACCCCTGAT
GAACCAACCC AGTTTGCTTC CGCGTTTGAA GTGACTTCAC TCGAGCAGGA TGGATTGGCA
GTAGGCCGGT TGACTGGTAT CGATATCGGT GCGGACGGTC TTGTTCGTGC AACCTATTCA
AACGGTACAT CTGAGCCAAT CATTCGTGTT GCGCTAGTGC GTTTTGCTAA TGACCAAGGT
TTGACGCAGC AAAGTAATAC CCAGTGGCAA GAAAGTATCC TATCCGGTGA AGCACTTGCC
GGTGAGGCAA CAACTGGTAC TTTTGGTGAC ATCAACTCAT CCGCATTAGA GCAGGCAAAC
GTGAACCTAA CCACTGAGCT AATTGACTTG ATTATCGCTC AACGGAACTT CCAAGCGAAC
TCTCGAGCGC TCGAAGTTAA CAATCAGCTT AACCAGACTA TCTTGAATAT TCGTTAA
|
|---|
| Protein sequence | MSFNIALSGV SAAQRDLDTT ANNIANVNTV GFKESRAEFG DVYASSLLAG GKTKVGDGVI
TQEVAQQFSQ GSLQFTNNSL DLAVTGNGFF ATIPEIDSRE FSFTRAGMFK LDAENFVVNS
NGDNLLGFPV NPDGTSSSVA LSTTQAVRIP DSSGSPQPTS EVSLKMNLPA GDDAVDLDLF
NPDDPLTYNA ATSVTVFDSL GDSHVMTYYF MKDQAATNEW VVTTYMDDIA LNTEGDTPGV
PPITGPNVVG ETTGSPVAGY RMTFSAGGDF TSIANADGTS SATGDITSVA LGGTILANGS
DPSQTITTNF AFDPGNATPD EPTQFASAFE VTSLEQDGLA VGRLTGIDIG ADGLVRATYS
NGTSEPIIRV ALVRFANDQG LTQQSNTQWQ ESILSGEALA GEATTGTFGD INSSALEQAN
VNLTTELIDL IIAQRNFQAN SRALEVNNQL NQTILNIR
|
|---|
| |