Gene Patl_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3093 
SymbolflgI 
ID4174865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3727859 
End bp3728971 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content49% 
IMG OID638056119 
Productflagellar basal body P-ring protein 
Protein accessionYP_662653 
Protein GI109899398 
COG category[N] Cell motility 
COG ID[COG1706] Flagellar basal-body P-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAC TTCTATTCAT TCTCATGATA TCGAGCATTA TTATTGTTCC GGTCGGCCAG 
GCTCAACGCA TAAAAGACCT AGCAAGTGTG CAGGGCGTAA GAAGTAACCA ACTGGTTGGA
TACGGTTTGG TGGTGGGTCT ACCTGGTACC GGTGAGCAAA GTCCGTTTAC TGAACAAAGT
TTTCGTACCA TGTTGTCGAA CTTCGGCATC AGCCTAGATA GCTCTTTAAA GCCTAAAATA
AAGAACGTGG CTGCTGTGGC AGTTCACGCC GAATTGCCGC CTTTTTTAAA GCCAGGGCAA
ACGATTGACG TAACGGTGAG CTCTGTTGGT GAAGCGGCAA GTTTGCGCGG GGGTACATTA
CTGCAAACTT TTCTAAAAGG TCTTGATGGC AAAGTGTATG CCGTTGCCCA GGGAAGCATG
GTAGTCAGCG GTTTTGGCGC TGAGGGAGCA GACGGTTCTA AAATTGTCGC CAACACGCCC
ACGGTTGGTC GTATCGCAAA CGGTGCTCTG ATAGAGCGCG CTGTGCCTAG CGGCTTCATG
CAAAATGACT TTTTAACGCT CAATTTAAAT TATCCGGATT TTTCAACAGC CAAGATCCTA
GCCGATACCA TTAATCAGCG TTTAGGGGCG GATCCCGATA AAGGATATGT GATTGCAACC
CCTATTGATG CAGCATCGGT TCGCGTGTCA GCCCCCCGAG ATGTAGGTCA GCGAGTGGGC
TTTTTAGCGA CGCTAGAAAA CTTTGAATTT ATGCCAGCTA AAGCACCCGC ACGCATCGTT
ATTAACAGTC GCACAGGGAC CATAGTGATT GGTCAAGATG TACGTCTGCT ACCCGCGGCC
ATTACACACG GTGGGTTAAC CGTGACAATC AGTGAAAATC AGCAGGTAAC ACAACCCAAC
CCATTAGGGC AGGGAGATAC AGTCGTTACA GACCAGTCCA TTATTGATGT GAATCTAGAC
GACACTCGCA TGTTTAAGTT TGATCCAGGC GTGACGTTGG ACCAACTAGT GCGCGCAGTA
AATGAAGTAG GTGCTGCGCC TGGTGATTTG ATGGCAATAC TTGAAGCACT CAGTGAGGCA
GGTGCCTTAC AAGGCGAGCT GGTCGTAATT TAG
 
Protein sequence
MKLLLFILMI SSIIIVPVGQ AQRIKDLASV QGVRSNQLVG YGLVVGLPGT GEQSPFTEQS 
FRTMLSNFGI SLDSSLKPKI KNVAAVAVHA ELPPFLKPGQ TIDVTVSSVG EAASLRGGTL
LQTFLKGLDG KVYAVAQGSM VVSGFGAEGA DGSKIVANTP TVGRIANGAL IERAVPSGFM
QNDFLTLNLN YPDFSTAKIL ADTINQRLGA DPDKGYVIAT PIDAASVRVS APRDVGQRVG
FLATLENFEF MPAKAPARIV INSRTGTIVI GQDVRLLPAA ITHGGLTVTI SENQQVTQPN
PLGQGDTVVT DQSIIDVNLD DTRMFKFDPG VTLDQLVRAV NEVGAAPGDL MAILEALSEA
GALQGELVVI