| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3092 |
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| Symbol | |
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| ID | 4174864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3726859 |
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| End bp | 3727668 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056118 |
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| Product | flagellar rod assembly protein/muramidase FlgJ |
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| Protein accession | YP_662652 |
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| Protein GI | 109899397 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1705] Muramidase (flagellum-specific) |
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| TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCTCA AGTCTATGCG AAAAGCTCAA GATGTTATGG CAGACAAAGA CAGCCCATTT
AACTCTGAAC AAGTTAAGTT TTATCGCGAT ATGCACGATC AGCAGTTAGC GACAGATATG
TCGAATAACG GCAGTATCGG CTTGGCTGAC ATTATCGTAA AACAGTTAAG CAAAGGTGGG
AACGGGTTCA CCCCCTCAAG CGTTATTCGA AATGATGGCA ACCTGTCCGA TATTAATCGC
CATAGTGCAC AAAGCATCCA TCAGGCCCAA CAAATAATAC TACCCGAACA ACGCCTGCCT
GAGACCGCAG CATCGAATGC AGGTTACAAA GATGCCGCTT TTAGTGATCA AAAAGAATTT
TTGGATGCGC TCTATCCTGT TGCTCAGCAA GTGGCGCAGG AACTAGGCAT CGAACCCAAA
GCATTATTGG CCCAAGCAGC CGTGGAAACA GGTTGGGGAC AGTACATGAT GCACACTGAA
AAAGGCAATA CACATAATTT GTTTGGTATT AAAGCCGGCA ATGGCTGGCA AGGTGACACT
GCAAAGGTGA ACACTATTGA GTTTGAACAA GGGCTTGCAG CGCCAAAAAA AGCACAATTT
AGAGCTTACA ATTCCTTCGA TGATGCGATG CAAGACTATG CATCATTTGT AAAAGACAAT
CCGAGATACA AGCAAGCGCT GCAAAATACT GGCGATCCTA AACGCTACTT CGCCGAGTTG
CAGCAAGCGG GTTATGCCAC AGACCCAACG TATGCGCAGA AAGTTATTTC CGTTCTAAAC
AGCGGCTCAC TGAGTAATTA TCAACCATGA
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| Protein sequence | MMLKSMRKAQ DVMADKDSPF NSEQVKFYRD MHDQQLATDM SNNGSIGLAD IIVKQLSKGG
NGFTPSSVIR NDGNLSDINR HSAQSIHQAQ QIILPEQRLP ETAASNAGYK DAAFSDQKEF
LDALYPVAQQ VAQELGIEPK ALLAQAAVET GWGQYMMHTE KGNTHNLFGI KAGNGWQGDT
AKVNTIEFEQ GLAAPKKAQF RAYNSFDDAM QDYASFVKDN PRYKQALQNT GDPKRYFAEL
QQAGYATDPT YAQKVISVLN SGSLSNYQP
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