| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3089 |
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| Symbol | |
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| ID | 4174861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3722422 |
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| End bp | 3723393 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056115 |
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| Product | signal peptide prediction |
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| Protein accession | YP_662649 |
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| Protein GI | 109899394 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTTTAT TAAAAGCGCC ACGGTCAAAA ATAATGCAAA TAAAACGTAT CAAACGCGTG
ACTCACGCAC ATAAACATCA CGCATTTAGC GATTTATGTG AATTTGAAGG GTCGCTTTAC
TGTTGTTTCA GAGTAGCAAG CAACCATGTG AGTGACGATG GTGTCATTAA CGTGTTAACC
CTCACCGATG ATGGCAAAGT AACGTATAAA CAGCACATTA GCCTGCCTTC TAGTGATTTG
CGTGACCCTA AGCTGAGTAT TACCCCCTCG GGGGAGCTCA TGTTATTGGC GTACTCTCGC
CGAATAAATT CGTCTGACTC TGCTAGCATA TTGGGGGCAC ATAGCCCGGT CGTGTGGACT
TCGCAGGATG GACTAAGTTG GTCCAGCGCC AAGAATATAG GTGATAAACA TTGGTGGCTA
TGGCGACTGC GTTGGCACAA ACAAAAAGCA TATGGGCTTG CATATAATCG TTCAGCCAAT
GCGGTACATT TGTACGGGGG TAACCCAAAG CGTAGCTTTC ACCTCGACAA AACCAATGCC
TTTAGTTTGC AAACCCATGA CAAAGGCTAC CCGAACGAAA GCGATATGTG TTTTGCAGAA
GATGGCACTG CTTATGTGGT TTTACGTAGA GACAGCGATA CTTATAGTGC CCAGTTTGGA
ATAAGTAAGT CACCTTACAC ACATTGGCAT TGGATTGATT TAGGCTTCTA TTTAGGTGGA
CCTAACATGC TAAAGCTCGA TGGCCACGAT GCGCTACTAG CAGGCAGGAT AATATATAAA
GGCAAATTCG TGACAGCGAT ACTAAATCTA GAGCTTAAAA GCGCAAAAAT CACACTGCTC
AAGGTTTTGC CATCAAGTGG GGATAATAGC TATCCCGGCA TGGTTAGACG CAAAGATACC
GTGTTTGTTA GTTATTATTC ATCACACCAA GACCAACAGG CTCACATATA TCTAGCTCAC
TTAGCCCTCT AA
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| Protein sequence | MVLLKAPRSK IMQIKRIKRV THAHKHHAFS DLCEFEGSLY CCFRVASNHV SDDGVINVLT
LTDDGKVTYK QHISLPSSDL RDPKLSITPS GELMLLAYSR RINSSDSASI LGAHSPVVWT
SQDGLSWSSA KNIGDKHWWL WRLRWHKQKA YGLAYNRSAN AVHLYGGNPK RSFHLDKTNA
FSLQTHDKGY PNESDMCFAE DGTAYVVLRR DSDTYSAQFG ISKSPYTHWH WIDLGFYLGG
PNMLKLDGHD ALLAGRIIYK GKFVTAILNL ELKSAKITLL KVLPSSGDNS YPGMVRRKDT
VFVSYYSSHQ DQQAHIYLAH LAL
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