Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3069 |
Symbol | |
ID | 4174841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3703688 |
End bp | 3704863 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638056095 |
Product | UDP-galactopyranose mutase |
Protein accession | YP_662629 |
Protein GI | 109899374 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0562] UDP-galactopyranose mutase |
TIGRFAM ID | [TIGR00031] UDP-galactopyranose mutase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.998088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAGTT TTGATGTTAT AGTCGTTGGT GCTGGTTTTT CTGGGGCCGT GATGGCTGAA CGTTTTGCCA GTCAGCAAAA TAAAAAGGTT TTAGTGTTAG AACAACGGTC TCATATTGCA GGTAATTGTT ATGACTACAC CGATGATTCG GGTATTACGG TGCATCAGTA TGGGCCTCAT TTGTTTCACA CCGATAAAGA GCATGTGTGG CAATATCTGA GTCAGTTTAC CCAGTGGACG CGCTACGAAC ATAAAGTACT GGGGTTTATT GATGGTAAAT TAGTGCCCAT CCCTTTTAAT CTGAATACTT TGTATCAACT CTACCCTGAT GAGCAAGCAC AGGAAATCGA AGCTTTATTA GTGCAGCAAT ATGGGGCAGG GGGCAAAGTG CCCATTCTGG AACTGAGAAA AAGTCAATTC GCTACACTGC AACAATTAGC TGAATTGGTT TACGAAAAGT TTTTTGTAAA TTATACGACT AAACAATGGG GTTGTTCACC TGAAGACATT TCACCTGAGG TTACCGCTAG AGTGCCCATA ATCGTCTCTA GAGACGACCG GTATTTTCAT GATAAATATC AAGCAATTCC AAGCCAAGGT TATACTCAGC TTATCGCCAA TTTATTAAAC CACGACAATA TAGAGGTACA ACTCAGTAGC GACGCAAGTA GTCTAATTCG CTTAAATGAC GCAACTAAGT CAGTGGAATT TAAGGGGCAA GCGTTTGACG GTAAATTGGT TTTTACTGGT ATGCTTGACC AATTATTTGA CTATTCAGAC GGGGAGTTAC CTTATCGGTC ACTGCAATTT GATTTTCAAA CCCTTAATAT TAGAGAGTTT CAACCAAATA CAACGGTTAA TTACCCCAAC GAACATGCGT ATACTCGCAT AACCGAATTC AAGCATATCC TAAGACAACA ATCAGACCAA ACCGTCATTG TAAAAGAATA CCCACAAGAC TATGACCGCC ACAATCCAAA TAAAAACGTC CCGTATTACC CGATTTTTAA TCAAGCTAAC CAAGAGCGAT TCGAGCAATA CAAACAAAGG TTGCAAGCGT TTGAGAACGT GATCACGGCT GGTAGGTTAG CTGATTATAA GTATTACAAT ATGGATGATG CGGTAGGTAA TGCGCTGAAT ATTTTTAATC GGTTCACTGG GCAAGGATTT GCTTAA
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Protein sequence | MSSFDVIVVG AGFSGAVMAE RFASQQNKKV LVLEQRSHIA GNCYDYTDDS GITVHQYGPH LFHTDKEHVW QYLSQFTQWT RYEHKVLGFI DGKLVPIPFN LNTLYQLYPD EQAQEIEALL VQQYGAGGKV PILELRKSQF ATLQQLAELV YEKFFVNYTT KQWGCSPEDI SPEVTARVPI IVSRDDRYFH DKYQAIPSQG YTQLIANLLN HDNIEVQLSS DASSLIRLND ATKSVEFKGQ AFDGKLVFTG MLDQLFDYSD GELPYRSLQF DFQTLNIREF QPNTTVNYPN EHAYTRITEF KHILRQQSDQ TVIVKEYPQD YDRHNPNKNV PYYPIFNQAN QERFEQYKQR LQAFENVITA GRLADYKYYN MDDAVGNALN IFNRFTGQGF A
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