Gene Patl_3069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3069 
Symbol 
ID4174841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3703688 
End bp3704863 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content40% 
IMG OID638056095 
ProductUDP-galactopyranose mutase 
Protein accessionYP_662629 
Protein GI109899374 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0562] UDP-galactopyranose mutase 
TIGRFAM ID[TIGR00031] UDP-galactopyranose mutase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.998088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAGTT TTGATGTTAT AGTCGTTGGT GCTGGTTTTT CTGGGGCCGT GATGGCTGAA 
CGTTTTGCCA GTCAGCAAAA TAAAAAGGTT TTAGTGTTAG AACAACGGTC TCATATTGCA
GGTAATTGTT ATGACTACAC CGATGATTCG GGTATTACGG TGCATCAGTA TGGGCCTCAT
TTGTTTCACA CCGATAAAGA GCATGTGTGG CAATATCTGA GTCAGTTTAC CCAGTGGACG
CGCTACGAAC ATAAAGTACT GGGGTTTATT GATGGTAAAT TAGTGCCCAT CCCTTTTAAT
CTGAATACTT TGTATCAACT CTACCCTGAT GAGCAAGCAC AGGAAATCGA AGCTTTATTA
GTGCAGCAAT ATGGGGCAGG GGGCAAAGTG CCCATTCTGG AACTGAGAAA AAGTCAATTC
GCTACACTGC AACAATTAGC TGAATTGGTT TACGAAAAGT TTTTTGTAAA TTATACGACT
AAACAATGGG GTTGTTCACC TGAAGACATT TCACCTGAGG TTACCGCTAG AGTGCCCATA
ATCGTCTCTA GAGACGACCG GTATTTTCAT GATAAATATC AAGCAATTCC AAGCCAAGGT
TATACTCAGC TTATCGCCAA TTTATTAAAC CACGACAATA TAGAGGTACA ACTCAGTAGC
GACGCAAGTA GTCTAATTCG CTTAAATGAC GCAACTAAGT CAGTGGAATT TAAGGGGCAA
GCGTTTGACG GTAAATTGGT TTTTACTGGT ATGCTTGACC AATTATTTGA CTATTCAGAC
GGGGAGTTAC CTTATCGGTC ACTGCAATTT GATTTTCAAA CCCTTAATAT TAGAGAGTTT
CAACCAAATA CAACGGTTAA TTACCCCAAC GAACATGCGT ATACTCGCAT AACCGAATTC
AAGCATATCC TAAGACAACA ATCAGACCAA ACCGTCATTG TAAAAGAATA CCCACAAGAC
TATGACCGCC ACAATCCAAA TAAAAACGTC CCGTATTACC CGATTTTTAA TCAAGCTAAC
CAAGAGCGAT TCGAGCAATA CAAACAAAGG TTGCAAGCGT TTGAGAACGT GATCACGGCT
GGTAGGTTAG CTGATTATAA GTATTACAAT ATGGATGATG CGGTAGGTAA TGCGCTGAAT
ATTTTTAATC GGTTCACTGG GCAAGGATTT GCTTAA
 
Protein sequence
MSSFDVIVVG AGFSGAVMAE RFASQQNKKV LVLEQRSHIA GNCYDYTDDS GITVHQYGPH 
LFHTDKEHVW QYLSQFTQWT RYEHKVLGFI DGKLVPIPFN LNTLYQLYPD EQAQEIEALL
VQQYGAGGKV PILELRKSQF ATLQQLAELV YEKFFVNYTT KQWGCSPEDI SPEVTARVPI
IVSRDDRYFH DKYQAIPSQG YTQLIANLLN HDNIEVQLSS DASSLIRLND ATKSVEFKGQ
AFDGKLVFTG MLDQLFDYSD GELPYRSLQF DFQTLNIREF QPNTTVNYPN EHAYTRITEF
KHILRQQSDQ TVIVKEYPQD YDRHNPNKNV PYYPIFNQAN QERFEQYKQR LQAFENVITA
GRLADYKYYN MDDAVGNALN IFNRFTGQGF A