| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3059 |
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| Symbol | |
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| ID | 4174831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3692981 |
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| End bp | 3694093 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638056085 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_662619 |
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| Protein GI | 109899364 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAATG TACTGGCAGC TAAACCATCC ATTACCCAAC GTGAAATAGA CTACGTTAAT
GATGCTATTT GTAATGGGTG GGGGGAGCAT TGTTACGATT ATTTAATTCG ATTTGAGAAC
GAGTTTAAAG CTTACCAAGA TTCACCATTT GGATTAGCAA CCTCAAGTTG CACTGGGGCA
TTACATATTG CATTTGCAAG TCTAGGGTTA AAGGCAAGAG ATGAAGTGAT TGTACCTGAT
ATTACTTGGA TTGCGTCAAT CTCGCCCATA GTGCAATTGG GCGCTACACC AGTTTTTGTG
GATGTTGAAG AAGAGTCTTG GTGTATAGAT CCCAAATCCG TAGAAGCAGC GATTACACCA
TTAACTAAAG CCATTTTGGT GGTGCATGTT TATGGAAATT TGGTCAACAT GGACGAAATT
ATGCGGATTG CCAAAAAGTA TAATTTGCCA GTAATAGAAG ATGCGGCTGA AGCATTAGGC
TCTGAATATA AAGGAAAAAA AGCCGGTTCA ATTGGCGATT ATGGTGTGTT CTCATTTCAT
GGTACTAAAA CAATGACCAC TGGCGAAGGT GGCATGTTAG TCAGTAATAA TCCGGGGTTA
TTTGCGCAAG CAAGCATCAT TGCCAACCAT GGTCGAGATC CGGCTGTGCC AAAGCTATTT
TGGTGTGAGC AAATTGGCCT AAAATATAAA ATGTCTAACT TGCAGGCTGC AATTGGCGTA
GCGCAATTAG AAAGAGTAGG CGAACTTGTT GATAACAAGC GCTGGATATT TGAACAATAC
GAAGCATGTC TTGTCCATGC CGATATCATA ATGAACCCCG AGATAGAAGG CTGCAAAAAT
AGCTATTGGA TGCCAACGAT AATATTGCCT GCTTCCTTTA CTCTAGAAAA ACGTGATGCG
CTTATCCAAG CGATGCTCAA AAAAAACATC CAAGTCAGGC CGTTTTTTTA TCCAGTGTCG
AGTTTCCCAA TGTTTACTCC TGTATTGGAC AACACCATTA GTTTGACGCT TTATCAAAGG
GGCATCAATC TACCAAGTTA TTTTGATATG GATGAACTAG ATATTGAATA TGTAGTAAGT
CATCTTAAAG AGCAGATCGC AGTTTTTAGA TAA
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| Protein sequence | MRNVLAAKPS ITQREIDYVN DAICNGWGEH CYDYLIRFEN EFKAYQDSPF GLATSSCTGA
LHIAFASLGL KARDEVIVPD ITWIASISPI VQLGATPVFV DVEEESWCID PKSVEAAITP
LTKAILVVHV YGNLVNMDEI MRIAKKYNLP VIEDAAEALG SEYKGKKAGS IGDYGVFSFH
GTKTMTTGEG GMLVSNNPGL FAQASIIANH GRDPAVPKLF WCEQIGLKYK MSNLQAAIGV
AQLERVGELV DNKRWIFEQY EACLVHADII MNPEIEGCKN SYWMPTIILP ASFTLEKRDA
LIQAMLKKNI QVRPFFYPVS SFPMFTPVLD NTISLTLYQR GINLPSYFDM DELDIEYVVS
HLKEQIAVFR
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