| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3050 |
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| Symbol | |
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| ID | 4174822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3681297 |
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| End bp | 3682493 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056076 |
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| Product | histidine kinase |
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| Protein accession | YP_662610 |
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| Protein GI | 109899355 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTAA GTAATTTACA GACCCAAAAC ACGACTCAGG CACCTTCTTC AAAAGGGGCT
GTTATATCGT TCTCACATTC TGTTGATGTA AATAGCACTT CCTCGCTTGG TCCAATTGAC
ACCACGCAAG ACATTCAGGC TCTGCGTCAA CAAGCCACTA GGTTGGAACA CTTATTACAA
GTCATGCCCG CAGGTGTGGT AGTTATTGAT GGTAAAGGCC ATGTGAAGCA GGCCAATCAT
TTAGCTAAAT CACTGTTGGG TGAGCCGTTG GAAGGGCAAG TGTGGCGTAA TATCATCAAG
CGCTCTTTTA AACCTCAAGC TGACGATGGG CATGAAGTGT CCTTGTTTGA CGGTCGCAAA
GTCAAATTGT CTATCACTCC CTTGGTAAAC GAACCAGGTC AGCTCATTGT ATTGACGGAT
TTGACCGAAA CGCGCCAACT TCAACAACGC ATCGGCCACC TGCAAAAATT GTCTTCTTTA
GGCAAAATGG TCGCCTCATT GGCTCATCAA ATTCGCACGC CGTTATCTGC AGCTATGTTA
TATGCCGCTA ACTTATCTAG CGGAGATTTG GCAAAGGAGT CTCGTCAGCG TTTCAGTGAT
AAATTGCTCT CTCGTTTACG TGATTTAGAA GGCCAAGTAA ACGACATGCT ACTGTTCGCC
AAAAGTGGCA ATGAACAAGT ACTCGTGGAT ATCTCTCTTG AGGACATGAT GCGTGAAGTG
AAAGCTGGCA GTGAAGCCAT GCTCAATAAG AGTGGCGGTA TCTTAGATAT CATATTACCC
GAGCCAAACA TTCATTTTAT AGGCAACAAG ACTGCTTTGA GTGGTGCGTT GCAAAACTTA
ATTCACAACG CACTAATTGC TAAATCAAAC GGTGCACGTA TTGTTTTTAG TGCTCAAAGA
GACGATCTAA AGCCAGATTG TATGCGCTTA ACAGTGACTG ACAATGGTCC CGGTATCCCC
AAAGACAAGA TTGATCATAT ATTTGAACCA TTTTTTACCA CTCGCAGCCA AGGTACAGGG
CTGGGGTTAG CTGTCGTTAA AACCGTCGTG CAGTCTCATC AGGGCGAAGT CAGTGTTTCA
AACTTAGCCT CTGGTGGCGC ATGTTTCACT ATCGTGCTGC CCATATTAAC GCGAACCGCA
GATGACGGCT TATCCGCTGG AGCAACAAAC ATTCACGCCC AACAGGCGAG GAGTTAA
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| Protein sequence | MALSNLQTQN TTQAPSSKGA VISFSHSVDV NSTSSLGPID TTQDIQALRQ QATRLEHLLQ
VMPAGVVVID GKGHVKQANH LAKSLLGEPL EGQVWRNIIK RSFKPQADDG HEVSLFDGRK
VKLSITPLVN EPGQLIVLTD LTETRQLQQR IGHLQKLSSL GKMVASLAHQ IRTPLSAAML
YAANLSSGDL AKESRQRFSD KLLSRLRDLE GQVNDMLLFA KSGNEQVLVD ISLEDMMREV
KAGSEAMLNK SGGILDIILP EPNIHFIGNK TALSGALQNL IHNALIAKSN GARIVFSAQR
DDLKPDCMRL TVTDNGPGIP KDKIDHIFEP FFTTRSQGTG LGLAVVKTVV QSHQGEVSVS
NLASGGACFT IVLPILTRTA DDGLSAGATN IHAQQARS
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