| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3048 |
|---|
| Symbol | |
|---|
| ID | 4174820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 3679281 |
|---|
| End bp | 3679622 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638056074 |
|---|
| Product | flagellar hook-basal body complex subunit FliE |
|---|
| Protein accession | YP_662608 |
|---|
| Protein GI | 109899353 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1677] Flagellar hook-basal body protein |
|---|
| TIGRFAM ID | [TIGR00205] flagellar hook-basal body complex protein FliE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCA AGGCACAATC TCTTTATCAA GACATGCAAA GCATGGCTTT GCAAAGCAAA
GCAGGATTAG GTGAAATCAA TCCTGCCAGC TTGAATGGTA TCCAGGTCAA TCCATCAGGG
GAAAACTTTG CCGATATGCT TGGCCAAGCG ATTGAGTCAG TCAACTCTAT GCAGTTAGAC
GCTAAAAGCC AAGCAGAGCG CTTTGAAATG GGAGATAAAA GTCTCAGTTT AGCGGATGTC
ATGGTAGCGA AAGAAAAGTC TAGTATAGCG TTTGAGGCCA CTATTCAAGT ACGTAACAAA
GTACTCGAAG CCTACAAAAC CATTATGAAC ATGCCGGTTT AG
|
|---|
| Protein sequence | MDIKAQSLYQ DMQSMALQSK AGLGEINPAS LNGIQVNPSG ENFADMLGQA IESVNSMQLD
AKSQAERFEM GDKSLSLADV MVAKEKSSIA FEATIQVRNK VLEAYKTIMN MPV
|
|---|
| |