Gene Patl_3044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3044 
SymbolfliI 
ID4174816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3674296 
End bp3675630 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content50% 
IMG OID638056070 
Productflagellum-specific ATP synthase 
Protein accessionYP_662604 
Protein GI109899349 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family
[TIGR03496] flagellar protein export ATPase FliI 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCTGG ATATCTTAGG GAATATTAAA GCACTGCAGC AACAAGTCCC TCAAGCTCCG 
GTCGTTGCAG CAGGCAAGTT GGTGCGTGGT ATCGGGTTAA CCCTCGAAGC GGTTGGGTGT
CAAATGCCAG TGGGGAGCCA ATGTTTAATA CAAACTGTAG ACGGTGAAAT AGAAGCTGAA
GTAGTGGGGT TTGCCGAACA CATTACCTAT TTAATGCCCA CTCAAGCAGT GAAAGGCATA
GTACCAGGCT CACGCGTTCA ACCCCTTAAT CGCGAACAAG GATTACCTGT TGGCATGTCG
CTATTAGGCA GAGTGGTTGA TGGAAACGGC CAACCTTTGG ACGGTTTAGG TGCCATTAAA
GCTGAGAAAC GTGTGCCATT AACGCGCCCA CCCATGAACC CCTTATCTAG GAAACCTATC
AGAGAGCCTC TGGACGTAGG CGTGCGCGCC ATAAATAGTA TGATCACGGT TGGCAGTGGT
CAGCGTATGG GCTTGTTTGC CGGCAGTGGC GTGGGTAAGA GCGTATTATT GGGTATGATG
ACCCGAGGAA CAAGCGCCGA CGTGGTTGTT GTTGGTTTGG TCGGTGAACG GGGCCGAGAA
GTAAAAGAAT TTATTCAAGA TATATTAGGC GATGAAGAGC GCCAAAAATC CGTTGTGGTT
GCCGCGCCAG CTGATACCTC GCCCCTGATG CGCTTAAAAG GGTGTGAAAC CGCGGTGACT
ATCGCGGAGT ATTTTCGCGA CAAAGGTATG AATGTGTTGT TGCTTGTGGA CTCACTGACG
CGTTACGCCA TGGCGCAGCG AGAAATAGCC CTTGCTGTTG GTGAGCCGCC AGCGACTAAA
GGGTATCCGC CGTCAGTATT TGCACGTTTA CCCGCATTAG TGGAACGTGC AGGAAATGGC
GGTGAACACC AAGGTTCGAT TACTGCGTTT TATACCGTGT TGACCGAAGG AGATGATTTA
CAAGATCCTA TCGCCGATTC AGCTAGGGCT ATTTTGGATG GGCATATTGT GCTTTCTCGT
CAATTAGCTG ACTCTGGGCA CTACCCTGCT ATAGATATCG AAGCCTCCAT AAGTCGAGTG
ATGCCCATGG TCGTAAGCCC TGAACATGTT CAAGTGGCGC GGCGTATTCG GCAAGTCTAC
TCAACTTACC AGCAAAATCG TGACCTCATC AGTATTGGTG CTTATACCAG GGGTAACGAT
CCGCGCATTG ATTTGTCCAT TAAGGCTGAG CCTGCGATCA ATGCTTTTTT ACAACAAGGC
ATGCAGCAAA TCTTACCCTT TGATGAAAGT GTAGAAACGA TGGTTAAGTT GGGTACCGGG
TTAGGGCCAG CATAA
 
Protein sequence
MPLDILGNIK ALQQQVPQAP VVAAGKLVRG IGLTLEAVGC QMPVGSQCLI QTVDGEIEAE 
VVGFAEHITY LMPTQAVKGI VPGSRVQPLN REQGLPVGMS LLGRVVDGNG QPLDGLGAIK
AEKRVPLTRP PMNPLSRKPI REPLDVGVRA INSMITVGSG QRMGLFAGSG VGKSVLLGMM
TRGTSADVVV VGLVGERGRE VKEFIQDILG DEERQKSVVV AAPADTSPLM RLKGCETAVT
IAEYFRDKGM NVLLLVDSLT RYAMAQREIA LAVGEPPATK GYPPSVFARL PALVERAGNG
GEHQGSITAF YTVLTEGDDL QDPIADSARA ILDGHIVLSR QLADSGHYPA IDIEASISRV
MPMVVSPEHV QVARRIRQVY STYQQNRDLI SIGAYTRGND PRIDLSIKAE PAINAFLQQG
MQQILPFDES VETMVKLGTG LGPA