| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3037 |
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| Symbol | fliP |
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| ID | 4174809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3667935 |
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| End bp | 3668690 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056063 |
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| Product | flagellar biosynthesis protein FliP |
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| Protein accession | YP_662597 |
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| Protein GI | 109899342 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
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| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAGA TTTTTTTACT GCTATTGGCG ACGGGACTAT TAATGGTTCC TAGTTGGGTT
CTTGCCGAGC CCGGTATCCC CGCGCTGACC ATGACTGAAA ACGCGGATGG CTCGCAAGAT
TACACCATGA CATTGCAAGT GGTGGCGATC ATGACTGCGC TGAGCTTGTT GCCTGCATTT
ATTATGATGA TGACGTCTTT CACTCGTATC ATCATCGTAC TCTCTATTTT GCGTCAAGCG
ATTGGTTTGC AACAATCCCC TTCCAACCAA ATATTGATAG GCGTGAGCTT ATTCCTGTCT
ATGTTTATCA TGGCGCCAGT GTTTGAAAAA ATTAATGAAA CAGCGCTGCA GCCATACTTA
AGTGAACAAA TCACCTCGAT ACAAGCTTAC GAACTAGCCA AAGAGCCGTT GCGGGGTTTT
ATGCTGGCAC AGACGAGAAT AAAAGATTTA GAAACATTTG TGGAAATAGG CGGCTATGAA
GATCAGTTTC AAGAGCCAGC CGATGTGCCA ATGAATGTGC TGATACCCGC TTTTGTCACT
AGCGAATTGA AAACCGCGTT TCAAATCGGT TTTATGTTGT TCATTCCATT TCTTATTTTG
GACTTGGTGG TAGCGTCAAT CCTCATGGCT ATGGGGATGA TGATGTTATC GCCTATGATC
GTTTCGCTGC CCTTCAAGCT AATGTTGTTC GTGTTGGTGG ATGGTTGGAA CCTTATTTTT
GGCACACTAG CAAACAGCTT TGGAATGGGG ACTTAG
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| Protein sequence | MNKIFLLLLA TGLLMVPSWV LAEPGIPALT MTENADGSQD YTMTLQVVAI MTALSLLPAF
IMMMTSFTRI IIVLSILRQA IGLQQSPSNQ ILIGVSLFLS MFIMAPVFEK INETALQPYL
SEQITSIQAY ELAKEPLRGF MLAQTRIKDL ETFVEIGGYE DQFQEPADVP MNVLIPAFVT
SELKTAFQIG FMLFIPFLIL DLVVASILMA MGMMMLSPMI VSLPFKLMLF VLVDGWNLIF
GTLANSFGMG T
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