Gene Patl_3032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3032 
Symbol 
ID4174804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3662155 
End bp3663486 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content45% 
IMG OID638056058 
ProductGTP-binding signal recognition particle 
Protein accessionYP_662592 
Protein GI109899337 
COG category[N] Cell motility 
COG ID[COG1419] Flagellar GTP-binding protein 
TIGRFAM ID[TIGR03499] flagellar biosynthetic protein FlhF 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATTA GACGCTTTTA TGGCAAAGAC ATGCGCGAGG CTTTGAAACA AGTCAAAGAC 
GAGTTGGGCG ATGATGCAGT CATCATGTCT AATAAAAAGC TAAGCAATGG TGTGGAAATT
GTCGCTGCAT ATGACAAAGA GCCAGCTGCA AGCCCTAAGC GCGCCGAGTC CAGTTTGACG
TCTGCACCGA AGCCCAGAGC AGAATCCACT CCTACCCTCA GTGAAATCAT CGGTGACAGC
GGACCGGATA GCCTTAGAGC ATTGCTTGAA AAACAAATTC AAGCAAAAGA GTCAGCTCAT
CAAGCGAGTC AGCCTGTTGC TCAGCCTGCA AAGCCTCAAA ATGTAACAAG TCAGCCGCAA
CGCCAAACGC AGGCGCAACC AGAGGTACCC AACGTACCGC ATCAGCAAGA CGCATTAAAT
GAAATGCGTC AAGAGCTAGC CTCTTTACGT AATGTGCTTC AGTTCCAAGT GGCTGGTCTT
TTGCAACAAG ACAAAGGACG AAACCATCCT TTACACGGCT ATTTAACCAA CAAGTTACAA
AAGATGGGTA TCAGTGAAGC ACTGGCCAAT GAAGTGGTTT CTTATACCCC GGCAGATACT
GATGAGCGTC AAGCTTGGTT GTTTTTATTA AAACTGCTGG CTAATCGCAT ACAAACTGAA
GAAAGTAACT TACTGACCAA AGGCGGCATC GCAGTTTTAA TGGGCCCTAC TGGGACTGGA
AAGACAACGA CTGTGGCAAA ACTTGCCGCA CAAGCTGCGC AAAAATACGG TGCTCAAAAT
GTCGGCTTGA TCACCATTGA CAGCTATCGA ATCGCTGCTT ACGAGCAAAT TTCTACCTAT
GCCAGAATTA TTGGTTGCTC GGTGAAAAAA GCGCAGAACG CTGAAGAGTT ATCAGATCTG
TTATTCCAGT TTAGGAATAA GCGCCTTATA CTTATTGATA CTGCAGGGTT TGGGCAAAGA
GATGTTAGAC TGATCAAGCA GTTAGAAACG TTGAAGCAGA GTACAACGGC GAATATCAGC
AGTTATTTGG TCATGCAAGC CAACAGTCAA TATCAAGTTA TGCAGCAAAC CATTGCTGCT
TACAAACAGA TTTCTTTACA GGGTTGTATT TTCACCAAAA TAGATGAATG CTACAGTCTT
GGAGAGGCAA TTAGTGCGGC CATCGAGCAC AAATTGTCCG TGAGCTTTAT TACCGATGGC
CAAAAGGTTC CGGAAGACTT GAAAGTGGCA GATGCAAAAT TTTTAATAAC CAGCGCCGCT
AAGCTTTATA AAAAGCACGT ATTAATTCAT ACTAGTGGTA ACTCACTAAA TAACGCAGCA
GTGGCAGTAT GA
 
Protein sequence
MKIRRFYGKD MREALKQVKD ELGDDAVIMS NKKLSNGVEI VAAYDKEPAA SPKRAESSLT 
SAPKPRAEST PTLSEIIGDS GPDSLRALLE KQIQAKESAH QASQPVAQPA KPQNVTSQPQ
RQTQAQPEVP NVPHQQDALN EMRQELASLR NVLQFQVAGL LQQDKGRNHP LHGYLTNKLQ
KMGISEALAN EVVSYTPADT DERQAWLFLL KLLANRIQTE ESNLLTKGGI AVLMGPTGTG
KTTTVAKLAA QAAQKYGAQN VGLITIDSYR IAAYEQISTY ARIIGCSVKK AQNAEELSDL
LFQFRNKRLI LIDTAGFGQR DVRLIKQLET LKQSTTANIS SYLVMQANSQ YQVMQQTIAA
YKQISLQGCI FTKIDECYSL GEAISAAIEH KLSVSFITDG QKVPEDLKVA DAKFLITSAA
KLYKKHVLIH TSGNSLNNAA VAV