Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3032 |
Symbol | |
ID | 4174804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3662155 |
End bp | 3663486 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056058 |
Product | GTP-binding signal recognition particle |
Protein accession | YP_662592 |
Protein GI | 109899337 |
COG category | [N] Cell motility |
COG ID | [COG1419] Flagellar GTP-binding protein |
TIGRFAM ID | [TIGR03499] flagellar biosynthetic protein FlhF |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAATTA GACGCTTTTA TGGCAAAGAC ATGCGCGAGG CTTTGAAACA AGTCAAAGAC GAGTTGGGCG ATGATGCAGT CATCATGTCT AATAAAAAGC TAAGCAATGG TGTGGAAATT GTCGCTGCAT ATGACAAAGA GCCAGCTGCA AGCCCTAAGC GCGCCGAGTC CAGTTTGACG TCTGCACCGA AGCCCAGAGC AGAATCCACT CCTACCCTCA GTGAAATCAT CGGTGACAGC GGACCGGATA GCCTTAGAGC ATTGCTTGAA AAACAAATTC AAGCAAAAGA GTCAGCTCAT CAAGCGAGTC AGCCTGTTGC TCAGCCTGCA AAGCCTCAAA ATGTAACAAG TCAGCCGCAA CGCCAAACGC AGGCGCAACC AGAGGTACCC AACGTACCGC ATCAGCAAGA CGCATTAAAT GAAATGCGTC AAGAGCTAGC CTCTTTACGT AATGTGCTTC AGTTCCAAGT GGCTGGTCTT TTGCAACAAG ACAAAGGACG AAACCATCCT TTACACGGCT ATTTAACCAA CAAGTTACAA AAGATGGGTA TCAGTGAAGC ACTGGCCAAT GAAGTGGTTT CTTATACCCC GGCAGATACT GATGAGCGTC AAGCTTGGTT GTTTTTATTA AAACTGCTGG CTAATCGCAT ACAAACTGAA GAAAGTAACT TACTGACCAA AGGCGGCATC GCAGTTTTAA TGGGCCCTAC TGGGACTGGA AAGACAACGA CTGTGGCAAA ACTTGCCGCA CAAGCTGCGC AAAAATACGG TGCTCAAAAT GTCGGCTTGA TCACCATTGA CAGCTATCGA ATCGCTGCTT ACGAGCAAAT TTCTACCTAT GCCAGAATTA TTGGTTGCTC GGTGAAAAAA GCGCAGAACG CTGAAGAGTT ATCAGATCTG TTATTCCAGT TTAGGAATAA GCGCCTTATA CTTATTGATA CTGCAGGGTT TGGGCAAAGA GATGTTAGAC TGATCAAGCA GTTAGAAACG TTGAAGCAGA GTACAACGGC GAATATCAGC AGTTATTTGG TCATGCAAGC CAACAGTCAA TATCAAGTTA TGCAGCAAAC CATTGCTGCT TACAAACAGA TTTCTTTACA GGGTTGTATT TTCACCAAAA TAGATGAATG CTACAGTCTT GGAGAGGCAA TTAGTGCGGC CATCGAGCAC AAATTGTCCG TGAGCTTTAT TACCGATGGC CAAAAGGTTC CGGAAGACTT GAAAGTGGCA GATGCAAAAT TTTTAATAAC CAGCGCCGCT AAGCTTTATA AAAAGCACGT ATTAATTCAT ACTAGTGGTA ACTCACTAAA TAACGCAGCA GTGGCAGTAT GA
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Protein sequence | MKIRRFYGKD MREALKQVKD ELGDDAVIMS NKKLSNGVEI VAAYDKEPAA SPKRAESSLT SAPKPRAEST PTLSEIIGDS GPDSLRALLE KQIQAKESAH QASQPVAQPA KPQNVTSQPQ RQTQAQPEVP NVPHQQDALN EMRQELASLR NVLQFQVAGL LQQDKGRNHP LHGYLTNKLQ KMGISEALAN EVVSYTPADT DERQAWLFLL KLLANRIQTE ESNLLTKGGI AVLMGPTGTG KTTTVAKLAA QAAQKYGAQN VGLITIDSYR IAAYEQISTY ARIIGCSVKK AQNAEELSDL LFQFRNKRLI LIDTAGFGQR DVRLIKQLET LKQSTTANIS SYLVMQANSQ YQVMQQTIAA YKQISLQGCI FTKIDECYSL GEAISAAIEH KLSVSFITDG QKVPEDLKVA DAKFLITSAA KLYKKHVLIH TSGNSLNNAA VAV
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