Gene Patl_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3025 
Symbol 
ID4174797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3655072 
End bp3655851 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content47% 
IMG OID638056051 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_662585 
Protein GI109899330 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGTAT GGACAGTAGC AAACCAAAAA GGGGGCGTTG GTAAAACTAC GACAACAGTC 
ACCCTAGGTG GTTTGCTTGC GCAGCGTGGA GCAAAGGTCG TCCTAATCGA TACCGATCCC
CATGCGTCCT TAAGTTACTA TTTTGGTATT GACTCTGACG AATTATCACG CAGTTTATAC
GATATCTTTA TTCACGAAGG GCCTTTAGAC AAAGGCGCTG TTTTAGATTG CTTATGCCCA
ACTAAACTTG ACTCGCTGTT CATCTTGCCT GCTAGCATGG CGCTAGCCAC ATTAGATCGC
AAGCTAGGGA ATCAAAGTGG CATGGGGTTA ACCCTTAAAA AAGCGCTCGG GTTGATCGAA
GATGAGTTCG AGTACGCGTT AATTGATTGC CCGCCTGTGT TAGGTGTACT CATGGTCAAT
GCGTTGGCTG CGTCTACCCG AGTGATTATT CCAGTTCAAA CCGAATTTTT AGCGCTCAAG
GGGTTAGAGC GAATGCTTGG CTCGTTGCAC ATTATGCAGC AGTCATTACG TAAGGAGTTT
CGCTATACCA TAGTGCCGAC CATGTTTGAT AAACGCGTAA AAGCGGCAAT AGGCGCCTAT
CACACATTAC GAGAAACCCA TGGTGATAAC GTTTGGCAGG GATTAATTCC TATCGATACT
AAGTTTAGAG ACGCCAGTTC AAACCACGCG TTACCTTCAA TTCACGCGCC TAAAGCACGA
GGCGTGGTAG CGTACACAAG TTTGTTGCGT CATTTACGTT TGTTAGGGGC TGCGAAATGA
 
Protein sequence
MKVWTVANQK GGVGKTTTTV TLGGLLAQRG AKVVLIDTDP HASLSYYFGI DSDELSRSLY 
DIFIHEGPLD KGAVLDCLCP TKLDSLFILP ASMALATLDR KLGNQSGMGL TLKKALGLIE
DEFEYALIDC PPVLGVLMVN ALAASTRVII PVQTEFLALK GLERMLGSLH IMQQSLRKEF
RYTIVPTMFD KRVKAAIGAY HTLRETHGDN VWQGLIPIDT KFRDASSNHA LPSIHAPKAR
GVVAYTSLLR HLRLLGAAK