Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3021 |
Symbol | |
ID | 4174793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3652013 |
End bp | 3652939 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638056047 |
Product | homoserine O-succinyltransferase |
Protein accession | YP_662581 |
Protein GI | 109899326 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1897] Homoserine trans-succinylase |
TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTATTC GAATTCCGAC AGAATTACCT GCACAAAGCA TTCTAAATAG TGAGAATATT TTTGTGATGG ATACCGATCG TGCTGCCATG CAGGACATTC GTCCGTTGGA AGTTGGTATC TTGAATTTAA TGCCCAACAA GATGGAAACA GAAGTGCAGT TCTTGCGTCT TTTATCCAAT ACGCCGTTAC AAATCAATGT GGACTTGATA CGCATCGACA ATCAAGCGCC AAAGAACACC CCTGAATCTC ATATGAAGGC GTTCTATCAA AACTTTGACG ATGTGGCGGA TAAGCAATAC GACGGATTGA TTGTCACTGG TGCGCCTTTG GCATTGTTGG ATTATGACGA CGTAAAATAT TGGCAAAAAA TGAAAGTGGT GTTGGAATGG GCTCAGCGCC ATGTGCAATC CACTTTGTTT TCATGCTGGG CTGCACACGC TGCCTTATAT CACTTCCACG GTAAAAACCG TAGGTTGCGT GACGAAAAGC TCAGTGGGAT ATTTGCTCAT CAAGTGAAGG ATGAACATAA CGAACTAATG CGCGGCTTTG ACCCCGTATT TCATGCCCCT CATTCGCGTT ATGGTGAAAT AAGCGTAGCA GACTACGAGT CGGTTGAAGG ACTTAGTGTG TTAGCTAGTT CAGAAAAGAC GGGGGCTTAT ATAGTTGCCT CAGACGACAA ACGATTGGTC TTCGTCACGG GACACCCTGA ATATGATCCT GATTCGTTGG ATCAAGAATA CAAGCGTGAC CTAAAAGCGG GATTAACCCC CAACATGCCA GAAAATTACT ATCCTGACGA TGACCCGGCA CAAGGGCCTT TAGTTACTTG GCGTGCTCAC GGTAGTTTGC TGTTTACCAA TTGGTTAAAC TATTACGTGT ATCAGAATAC GCCTTATGAT TTAGCATCAT TGTCGAACAA AGCTTAG
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Protein sequence | MPIRIPTELP AQSILNSENI FVMDTDRAAM QDIRPLEVGI LNLMPNKMET EVQFLRLLSN TPLQINVDLI RIDNQAPKNT PESHMKAFYQ NFDDVADKQY DGLIVTGAPL ALLDYDDVKY WQKMKVVLEW AQRHVQSTLF SCWAAHAALY HFHGKNRRLR DEKLSGIFAH QVKDEHNELM RGFDPVFHAP HSRYGEISVA DYESVEGLSV LASSEKTGAY IVASDDKRLV FVTGHPEYDP DSLDQEYKRD LKAGLTPNMP ENYYPDDDPA QGPLVTWRAH GSLLFTNWLN YYVYQNTPYD LASLSNKA
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