| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3008 |
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| Symbol | |
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| ID | 4174778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3635709 |
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| End bp | 3636602 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638056033 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_662570 |
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| Protein GI | 109899315 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGTC TTAATTTATA CCAAGAAGAG TATTACCCTT CTCCCATACA AAATACGTGG
AAAGAATTTA AAGAGAATCA TGCAGCCGTA TTGAGCCTGT ATTGCGTTGT TTTCTTTATT
TTTATTATGA TTTTCGGTCC GTTCTTGGCC CCATATGATC CATTGCAACA AAATATTGAT
TTGCTATTAG TGCCTCCCGC TTGGGATAAC AACGGCGATA TCAGTTACTT ATTTGGTACC
GACGGTCTAG GCCGAGATAT GCTATCGCGT ATCATTTATG GCTGCAGAAT GACGTTTGGT
ATTAGCTTAG TGTTGGTAAT CATTTCAATG CTGATAGGCG TTGCGCTAGG CGCCATGGCT
GGTATGAGTA AAGGATTGCG CTCCAGCGTG GTAAACCACC TACTTGATTC AATCATGGCT
ATCCCTACTT TACTCATTGC CATTATCATT ATTGCCATTG TCGGCACGGG TCTTGTGAAT
AGCATGTGGG CTATCTCACT CGCGCTTATT CCACAGTTTA TTCACCAAAC CCGAGACATA
GTGCGCCAAA AAATGAAGAA AGAATATGTA CTGGCCGCCC AGCTCGATGG AGCGGGCAAG
GTACACATAT TTTTCAATTC AATATTGCCC AACATGGCTG AAATGCTAGT AGTGCAAGTG
ACCCTTTCAT TGTCTGTTGC GATATTGGAT ATCAGCGCAT TAGGCTTTTT AAATTTAGGT
GCGCAAGCCC CTTCTCCCGA GCTTGGCGCG TTATTATCTG AAGGGTTAAC CACAGCTTAC
GTTGCCCCAT GGAACATTGC TATTCCAGGG GGAGCAATAT TCTTTATGAT GATGTCAATT
AACTTAGTGG GTGACGGTTT ACGCTCAGCT TTACGCTATA GGTTGTTACG CTAA
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| Protein sequence | MPRLNLYQEE YYPSPIQNTW KEFKENHAAV LSLYCVVFFI FIMIFGPFLA PYDPLQQNID
LLLVPPAWDN NGDISYLFGT DGLGRDMLSR IIYGCRMTFG ISLVLVIISM LIGVALGAMA
GMSKGLRSSV VNHLLDSIMA IPTLLIAIII IAIVGTGLVN SMWAISLALI PQFIHQTRDI
VRQKMKKEYV LAAQLDGAGK VHIFFNSILP NMAEMLVVQV TLSLSVAILD ISALGFLNLG
AQAPSPELGA LLSEGLTTAY VAPWNIAIPG GAIFFMMMSI NLVGDGLRSA LRYRLLR
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