| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3007 |
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| Symbol | |
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| ID | 4174777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3634691 |
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| End bp | 3635722 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638056032 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_662569 |
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| Protein GI | 109899314 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAGA TTATATTGCG TCACGTGAGC TTACTGATAT TGACCTTATT TATTTTAAGC
TTTTTCTCAT TCTCTTTAGC GTATTTATTT CCGGGCGATC CCTTGGTGAA TTTAACCGGT
ATCCGCGATA GTTCTGAGCA AGGGTATGCT ATTTTGGCTC AACAATACGC TATGCAAGAC
TCCTTCTTAA GCCAATATTG GCAGTACGTT AACCATCTAT TTTCTGGAAA CTGGGGGCTG
AGTTTCAGCT CTGGCTTGCC GTTAGCAGAA GAAATCAGCC GCTCACTGGC AGCCAGCGTT
GAACTTAGCG CATACGCACT GATTGTTTCT TTTGTTGTTG GATTACCCTT GGGCTTCCTT
GCGGGCTTAC GGCATCATAA ATTGACCGAC TTTGCCCTTT TGACCACCAG TGTAATCGGA
TACTCTATCC CCGTCTTTTG GGCAGCCTTA ATTGCTATTT TAATTTTCTC GATTCAACTG
GGCTGGTTCC CGCTTTCAGG CAGAATTAGT TTGCTTTACG ATGTCCCCTA CCAGACGGGA
TTCATTTTAA TTGATATATT GTTAAGTGAC TTACCCGACA AAGAATTTGC CTTTAAAGAT
GCACTTCGTC ATTTAGTCTT ACCAAGTGTT TCGATCGCCA TTGTGACCTG TACTATTGTC
ATGCGTATTA CACGGCGCTC AGTAGTTGAG GTGATGAGCA GTGAGTACAT ACAAGCGGCT
TATGCTCGTG GCTTAAGCCC GAGACAAGTT TTTTTGCGCC ACGGAGTGAA AAATGCACTT
ATTCCGATTT TACCCTTATT GGTTATGCAA TTTACCACCT TGCTTACCAA CGCTATGATT
GTAGAAACCA TATTCTCTTG GCCAGGTATT GGCAACGGAC TCATTCAAGC TATTTACCAA
CGAGACTTTC CCGCTATCCG TGCTGGTATG TTAGCCGTAT CTGCTTTGGT ACTTACTTTT
ACCATTACGA TAGATATGGT TATTCAAATA TTTGACCCTG CGGGCAGAAG GCCAGAAAAT
GCCACGTCTT AA
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| Protein sequence | MLKIILRHVS LLILTLFILS FFSFSLAYLF PGDPLVNLTG IRDSSEQGYA ILAQQYAMQD
SFLSQYWQYV NHLFSGNWGL SFSSGLPLAE EISRSLAASV ELSAYALIVS FVVGLPLGFL
AGLRHHKLTD FALLTTSVIG YSIPVFWAAL IAILIFSIQL GWFPLSGRIS LLYDVPYQTG
FILIDILLSD LPDKEFAFKD ALRHLVLPSV SIAIVTCTIV MRITRRSVVE VMSSEYIQAA
YARGLSPRQV FLRHGVKNAL IPILPLLVMQ FTTLLTNAMI VETIFSWPGI GNGLIQAIYQ
RDFPAIRAGM LAVSALVLTF TITIDMVIQI FDPAGRRPEN ATS
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