| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3001 |
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| Symbol | |
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| ID | 4174771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3628735 |
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| End bp | 3630159 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056026 |
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| Product | protein of unknown function DUF463, YcjX-like protein |
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| Protein accession | YP_662563 |
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| Protein GI | 109899308 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3106] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC TGTTAAATAC CAGCCACTTA ATCGAGAAAG TGAAGCATAA CGTGAAAGTG
ACTGGGGCAC GTATCGCCGA TAGGCATCTT AATCTTGCCG TGACCGGTTT GAGTGGCAGT
GGCAAAACAG CGTTCATAAC CTCGATTGTT AACCAGCTAT TAGAAGCAAA TGAAACGGCT
GAATTAGCCT TTTTCTCAGT GGTGAGAGAA GAGCGCTTGA TTGGGGTAAA GCGTGAAGCG
CAACCCAATC TTAGTTTAAA ACGTTTTGCC TATGAGCAAG CGATGCAAGC GCTGAATGCT
TCGCCGCCGA CTTGGCCTGA GTCAACGACT GGCATCAGTC AAGTGAGGCT ACACATTCGT
TATCGCAAAG ACTCTGGCCT ATCCCGTTAC ATAAGTGAAG ATACTAAGCT CACACTTGAT
ATTACTGATT ATCCGGGCGA ATGGTTGCTC GACTTACCTT TATTGGAAAT GGATTTTTTA
GCATGGTCAG AATATTGTGA ATCGGAGCTT CAGTCACTGG AGCGTCAAGC ACTGGCCAGC
GATTTTCTGA TAGCCAGGGA TGCACTCGAT TTAGACGCGG AGGGAGATGA GCTCGGCCTA
AAGCACGTTG CCAAACTGTA TACTGATTAT CTGCATAAGT GTCGCAATGC TGGGTTTCAA
CTGCTGCAAC CTGGGCGTTT TATTCTGCCA GGTGAGTTGG CCGGTGCGCC AGTGTTGGAC
TTTTTCCCAT TATCAGCAAC ACAGATTGAA CGACTCGCAC AAAATCGTAA GCGAAAGGGC
AGCAATCAAG ACTTACTTTT CAGACGCTAT GAACACTATC AAGAGCAAGT CGTTAAACCG
TTTTATGTAG AGCATTTTAA ACGCTTCGAT CGCCAAGTTG TATTGGTAGA TTGTTTATCT
GCGTTAAATA ATGGCAAAGC GCATTTTGAC GATTTGCAGC GCGCATTGAA TTGGCTGCTA
ACCAGTTTTT CCTATGGAAA ATCGAATTTA TTATCACGTT TGTTCACACC TAAAATTGAT
AAACTCATTT TTGCCGCAAG CAAAGCTGAT CATGTCACTC CTGATCAGCA AAGTAACTTG
GTGAAATTGT TGGACTCCAT GCTACACAAT GCAAGAAAAC AAATGCAATT TGATGGTGTA
TCCACAGAAT CTACAGCAAT AGCCGCTATT CGGGCGTCTC GTGCTGGCAG AGCTGAGCAT
GCGGGGCAAG ACATTCAGAT TTTGCAAGGC GCAGATGCTG ACGGAAAACC TATTCGTTTG
TTTCCAGGGG ATGTACCAGC AAAGTGCCCC GACGGTCAAT TTTGGCGTCA GCAGGGGTTT
GATTTTCCCC GCTTCGCACC GCCCGTCAGA GAAGAAAATC ATGCATTGCC GCATATCAGA
ATGGACAGAG TCCTAGAGTT TATTCTTGGA GATAAAATAC GATGA
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| Protein sequence | MKKLLNTSHL IEKVKHNVKV TGARIADRHL NLAVTGLSGS GKTAFITSIV NQLLEANETA
ELAFFSVVRE ERLIGVKREA QPNLSLKRFA YEQAMQALNA SPPTWPESTT GISQVRLHIR
YRKDSGLSRY ISEDTKLTLD ITDYPGEWLL DLPLLEMDFL AWSEYCESEL QSLERQALAS
DFLIARDALD LDAEGDELGL KHVAKLYTDY LHKCRNAGFQ LLQPGRFILP GELAGAPVLD
FFPLSATQIE RLAQNRKRKG SNQDLLFRRY EHYQEQVVKP FYVEHFKRFD RQVVLVDCLS
ALNNGKAHFD DLQRALNWLL TSFSYGKSNL LSRLFTPKID KLIFAASKAD HVTPDQQSNL
VKLLDSMLHN ARKQMQFDGV STESTAIAAI RASRAGRAEH AGQDIQILQG ADADGKPIRL
FPGDVPAKCP DGQFWRQQGF DFPRFAPPVR EENHALPHIR MDRVLEFILG DKIR
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