| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2987 |
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| Symbol | |
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| ID | 4174757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3610784 |
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| End bp | 3611185 |
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| Gene Length | 402 bp |
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| Protein Length | 133 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056012 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_662549 |
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| Protein GI | 109899294 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.369399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCGCA AAGTACGTGT TGAAGAAGAA GATGCTGCGA TAGACATGAC GCCGATGTTG
GACATCGTGT TTATCATGCT GATCTTCTTT ATTGTAACGA CTGTTTTCGT TAAAGAAGCG
GGCATCGAGG TTAACAAACC TGGTGCTACG CAAGCGATTA TGCCCAAGAA TGCCAACATC
TTTATCGCAA TTACTGAAGA CGGTGACGTC TGGATGGATA AGCGTGAAAT TGATGTTGAC
AGTGTTCGTG CTAATTTAGA GCGCCTGATG GCTGAACAGC CTTCAGATGT TGTAATAGTT
CAAGCTGACG AAAATGCAGA ACATGGTGTG GTGATCGACG TAATGGATCA AATCAAAGCT
GCAGGTATAG ATCGCATTTC TATTGCTGCG AAGGGGAACT AA
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| Protein sequence | MARKVRVEEE DAAIDMTPML DIVFIMLIFF IVTTVFVKEA GIEVNKPGAT QAIMPKNANI
FIAITEDGDV WMDKREIDVD SVRANLERLM AEQPSDVVIV QADENAEHGV VIDVMDQIKA
AGIDRISIAA KGN
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