Gene Patl_2976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2976 
Symbol 
ID4174746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp3601262 
End bp3601948 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content41% 
IMG OID638056001 
Producthypothetical protein 
Protein accessionYP_662538 
Protein GI109899283 
COG category 
COG ID 
TIGRFAM ID[TIGR02145] Fibrobacter succinogenes major paralogous domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAACTC CTATATCGTC ATCAGCTAAC GACGAGAATA ATCTGAAAAG CAGCGCACGC 
GACGCGATTC AAAACGCTAA CCAAGAAACA GTTCAAGACA TTGACGGTAA CACTTATCGC 
ACAGTGAAAA TTGGCGAGCA AATCTGGTTA GCTGAAAACT TAAGGGTCAC TAAGTATCAA 
GACGGAACTA AGATTAATAC TGGCTTTATT CCCGATGATA AAGAAGAAAA CCTATTAAAA 
CATGGCCGAC TCTACGATTG GCACGATGTA GTGGATGAGC GAAATATTTG CCCAGTTGGT 
TGGCGAATAG CATCAGATGA TGATTGGAAA GCCTTGGAAA AAAGTATTGG TATATCTGAG 
TCTGAACTAG ATACACTCGG CTGGAGAGGT GACAATGATA TTGCCATTAC ACTTAAAGCC 
GAGCAACAAG ACACAATTTT TAAAGGTTTT GATCAGTCAC AGGTAAACAA ATATCAATTC 
TCAGCTAGCC CAGCGGGTGT CAAAATTGGC AATTGGTATC TTACACAAGG TATGTATACA 
GAATTTTGGA CCGGCAGCTC TGCCACTGAA AAACAAGCCT ACGCCAGAAC CCTTGCTTAT 
TCTTGGTGGA ATACACACAA AGGAGAAATT CGCCGGGAAA AGCTAAACAA GAATTACATG 
TTTTCTGTAA GATGCGTGAA AAATTAG
 
Protein sequence
MLTPISSSAN DENNLKSSAR DAIQNANQET VQDIDGNTYR TVKIGEQIWL AENLRVTKYQ 
DGTKINTGFI PDDKEENLLK HGRLYDWHDV VDERNICPVG WRIASDDDWK ALEKSIGISE 
SELDTLGWRG DNDIAITLKA EQQDTIFKGF DQSQVNKYQF SASPAGVKIG NWYLTQGMYT 
EFWTGSSATE KQAYARTLAY SWWNTHKGEI RREKLNKNYM FSVRCVKN