| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2975 |
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| Symbol | |
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| ID | 4174745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3600513 |
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| End bp | 3601277 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638056000 |
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| Product | lipase, putative |
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| Protein accession | YP_662537 |
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| Protein GI | 109899282 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGAAA AATTAGAGCC AATAATGACA AAGAGCATAG TTACCAGCAT TCTATTTTTT
CTAAGCCAGC AAATAGCTGG CTGTGCCAAC TCTACTGAAA GCTTACCTAC CTACAAACCA
GATGATGAGC TTGTAGTAAT AGCTCATGGG TTAGGGAGAA GCGACTGGGC AATGTGGCGT
TTTGCACAAC GATTAGAGGA TGCTGGCTAT AAAGTCTGTA GTTTGGATTA TCAGAGTATC
GGTGTAAGTG TTGCTGAGGT ATTGACAGAA ACACGCACCC AAATCGACGC ATGTATTTTA
AACGCCCCAA AGGTGCATTT TGTGGGGCAC TCCCTTGGCG GATTGGTTAT TAGAGGTTAC
CTACAAAATA AAACTCACAA GTTACAAAAA GCTAGAATTG GCGAAGTTGT ACTCATTGGC
ACCCCCAACA AAGGAAGTGA GTTGGCCGAT CACTTGAGTG ACTCGTGGTT AATGGATATT
GGCGGCGGCA TAAGTCGCGC ATTGGTTACT GGGACTCACA GCTTAGGCAA CAACTTGAAT
GCTTTAGATG TGAATATTGG GGTAATTGCA GGTACAAAAT CATTTGGCCT AACCAATGCA
AACTTTACAG GCCCAAATGA TGGATTAGTA TCGGTGGCGT CAACCAAGGT AGATACCATG
AGTGATTTCA TTACCATTGA AGTGAGTCAT TCTATGATGC GTTATAACCT AGAAGTTGCC
CAGCAAACTA TTCACTTTTT GCAAAAAGGA ATGTTTAAGC ATTGA
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| Protein sequence | MREKLEPIMT KSIVTSILFF LSQQIAGCAN STESLPTYKP DDELVVIAHG LGRSDWAMWR
FAQRLEDAGY KVCSLDYQSI GVSVAEVLTE TRTQIDACIL NAPKVHFVGH SLGGLVIRGY
LQNKTHKLQK ARIGEVVLIG TPNKGSELAD HLSDSWLMDI GGGISRALVT GTHSLGNNLN
ALDVNIGVIA GTKSFGLTNA NFTGPNDGLV SVASTKVDTM SDFITIEVSH SMMRYNLEVA
QQTIHFLQKG MFKH
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