| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2967 |
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| Symbol | |
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| ID | 4174737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3592794 |
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| End bp | 3595466 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638055992 |
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| Product | electron transport complex, RnfABCDGE type, C subunit |
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| Protein accession | YP_662529 |
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| Protein GI | 109899274 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.390488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGTG AACTAATTCC TGCCTACGAA GACATCGTGA CGCGTGTACA AAACAACAAA
TTATGGGATT TCCCCGGAGG GGTTTTTCCT GCACAGCAAA AAGAATTATC TAATCAACAA
CCGATCGAAA GTATCTCACT GCCTGAACGA CTGTATATTC CGCTTAAGCA GCACATCGGA
GTCGAAGGAC AATTAATCGT TGCGCCAGGC GAGCAAGTAC TAAAAGGCCA ACCACTGACG
CGAAGTGCAA ACCCATTTTC AGTGCCGGTG CATGCGCCTA CTTCGGGCAC GGTTGTGAGT
ATCGGTCCAC ATATTTCAGC GCATCCGTCT GCGTTACCCG AGCAAACCCT GATCATCGAG
CCCGATAATC TAGACAAATG GGCAATCTTA AGCCCATTAC AAGATTATCA ATCACTGCCC
AAAGTAACAG TGCTTGAAGC GATTTGTAAT GCAGGCATAT CAGGGATGGG CGGTGCGGGG
TTTCCTACGC ATATAAAAGC GGCACCGAAG AAAGATGTCG AGTTCATTAT TATCAATGGT
GTGGAGTGTG AGCCGTACAT TACTTCTGAT GACCGTTTAA TGCGAGAGCA CGCTTGGCAA
ATTCGTCAAG GTATCGATGT CTTATGCCAT TTATTATCCC CTAAGCAAGT TTACATTGCG
ATTGAAGACA ACAAACCTGA AGCTATAGAA GCGATGCGCG TCGCGTGCCA GCAAAGCGAA
CAATATAAAG TCGTTCCTAT TGCGACCAAA TACCCCGCGG GTGGCGAGAA GCAACTGATC
CAAGTCATCA CAAACAGAGA AGTCCCCAAA CAAGGGTTGC CCATAGATGT AGGGGTGATC
ATGCATAATG TGGGAACTTG TTTTGCTATT GCTGATGCGA TTTTTAGTGG CAAACCGCTA
ATACAACGCG TAGTCACAAT TACGGGCAAG GCAGTTGAAA CCCCAAAAAA TGTTTGGGCG
TTGATCGGCT CCCCTGTGGC GCATTTGCTT TCCTCTGCTG GTTATGTGGC CCACAGGCAG
GCGCAAAAAC ACATTATCAT GGGCGGGCCT ATGATGGGCT TTACCGTGGC AAGCGATCAA
GTGCCCGTGG TTAAGATAAC GAATTGTTTG TTACTCCCCA CATCTGATGA AATGGCTGAG
CCTGAAGCGG AACAACCTTG TATTCGCTGC AGCGCGTGTG CTGATGCGTG CCCTGTATCC
CTGTTACCAC AACAGTTATT CTGGCACAGC AAAGCCAAAG AGTTAGACAA AGCCCAAGAT
TACAATTTGT TTGATTGCAT AGAATGCGGC GCTTGTGCGT ATGTATGCCC CAGCGAAATT
CCATTAGTAC ATTATTACCG CGTAGCAAAA GCCGAAATTC GAGTAGAGCA AGAAGAGAAG
CAAAAATCAG ACAAAGCGAG AGAGCGCTTT GAAAGCCGAG CTGCACGTTT GGTGCGAGAA
CAAGAAGCCC GAGATGAAAA GCATCGCAAA GCAGCCGAAG CGCGCAAGTC AGCCATGCAA
AATAAAGGCA ATGACGCTCA AGATAAAATC GCCGCTGCGC TTGCGCGGGC CAAAGCTAAA
AAGGCTGAGC AGGTACAAAC AACGGCAAAT AATCCAGATG TCAGTTCTGA ACAGGCAACA
CTGCCCAAAG CAGCTGAGTC CGCGACAGTG ACAAGCACAG AATCAGCAAC TCAAAAATCT
GGTACTTCAA AAGATGATCG CGTGGCAGCG GCTATTGCTA GAGCGAAAGC CAAGAAAGCA
CAGCGTTCGG CGCCGGTGGA GGCTGATATA AGCTCTGAGC ATGAAACCCA GTCCGAAGCA
GCTGAGCCCG CGACAGTGAC AAGCACAGAA TCAGCAACTC AAAAATCTGG TACGTCAAAA
GATGATCGTG TGGCAGCGGC TATTGCTAGA GCGAAAGCCA AGAAAGCACA GCGTTCGGCG
CCGCTGGAGG CTGATACAAG CTCTGAGCAT GAAACGCAGC CCAAGACAGT GGAAAACTCA
CAAGCAACAG GCGCAGAGAC CGCAAGCCAA AAATCTGGTA CTGCCAAAGA TGAGCGCGTG
GCAGCGGCTA TTGCTAGAGC GAAAGCTAAA AAAGCACAAA AATCTGCCGA AAATTTAGCT
TCGAATCCCC CCAGTGAGTC AGACACCTCG CTTGATGCCC CCACTACTGC ATCTGATAGC
GCTTCGATTC GTTCGTTAAA TAAACCGAAC GCACAAACAC AGAGTAATGA CGCTGTTAAG
TCGAAAGACG AGCGTGTTGC AGCCGCTATC GCCAAGGCCA AAGCTAAAAA AACGCTGAAG
GAAACACAAA ATGCTTCTGC CGAGAGCGGC TCGGCATCCG GGCCAATTTC TAACCACCAA
AGTGAGCCTG CTCAAGAGCC GGTAGAGAAA ACACCTGAAC AGTATGACGT TCAGGAGCGT
GATCCTGCTG AACAGAAAAA GGCACGAATT GCCGCTGCGG TAGCCAAAGC GAAAGCGAAA
AAATTAGCTA AAGACCAAAC GTCGGGTGAA ACGCAAAGTC CGAGTGACAA ACCTATTACG
CCTTCACCGG AGGCTCAAGA TGCTCAACAG ACCCAAGAGC CCCAGGTAAC TGATGCCGAA
CACGCATTAG ACGAGAAGAA ACGCCGCATC GCTGCTGCCG TAGCGAAAGC GAAAGCTAAA
AAGGCGGCTC AAATGAAATC ATCAGAAGAA TAA
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| Protein sequence | MNRELIPAYE DIVTRVQNNK LWDFPGGVFP AQQKELSNQQ PIESISLPER LYIPLKQHIG
VEGQLIVAPG EQVLKGQPLT RSANPFSVPV HAPTSGTVVS IGPHISAHPS ALPEQTLIIE
PDNLDKWAIL SPLQDYQSLP KVTVLEAICN AGISGMGGAG FPTHIKAAPK KDVEFIIING
VECEPYITSD DRLMREHAWQ IRQGIDVLCH LLSPKQVYIA IEDNKPEAIE AMRVACQQSE
QYKVVPIATK YPAGGEKQLI QVITNREVPK QGLPIDVGVI MHNVGTCFAI ADAIFSGKPL
IQRVVTITGK AVETPKNVWA LIGSPVAHLL SSAGYVAHRQ AQKHIIMGGP MMGFTVASDQ
VPVVKITNCL LLPTSDEMAE PEAEQPCIRC SACADACPVS LLPQQLFWHS KAKELDKAQD
YNLFDCIECG ACAYVCPSEI PLVHYYRVAK AEIRVEQEEK QKSDKARERF ESRAARLVRE
QEARDEKHRK AAEARKSAMQ NKGNDAQDKI AAALARAKAK KAEQVQTTAN NPDVSSEQAT
LPKAAESATV TSTESATQKS GTSKDDRVAA AIARAKAKKA QRSAPVEADI SSEHETQSEA
AEPATVTSTE SATQKSGTSK DDRVAAAIAR AKAKKAQRSA PLEADTSSEH ETQPKTVENS
QATGAETASQ KSGTAKDERV AAAIARAKAK KAQKSAENLA SNPPSESDTS LDAPTTASDS
ASIRSLNKPN AQTQSNDAVK SKDERVAAAI AKAKAKKTLK ETQNASAESG SASGPISNHQ
SEPAQEPVEK TPEQYDVQER DPAEQKKARI AAAVAKAKAK KLAKDQTSGE TQSPSDKPIT
PSPEAQDAQQ TQEPQVTDAE HALDEKKRRI AAAVAKAKAK KAAQMKSSEE
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