| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2966 |
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| Symbol | |
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| ID | 4174736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3592228 |
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| End bp | 3592794 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638055991 |
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| Product | electron transport complex protein RnfB |
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| Protein accession | YP_662528 |
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| Protein GI | 109899273 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
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| TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0244352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTTTTA TGTGGGCCAT TTTTACCGCA CTTATCGCAG TAGGGCTGCT TGCCTTAGTA
TTCGGAGCCA TACTCGGTTT CGCGTCAATA CGCTTTAAGG TTGAAGGCGA CCCTTTAGTT
GAACAAATCG ATGAACTATT ACCACAAACC CAATGTGGTC AGTGTGGGTA CCCGGGGTGC
AAACCTTACG CCCAAGCCAT TGCTGATGGT GATGATATCA ATAAATGCCC CCCCGGAGGA
GACGCCACCA TAAAGCGTCT TGCCGATTTG ATGGGAGTTG AAGCCACATC TCTTGATGCG
GCTCATGGCA GTGAAGACAT AAAAAAAGTC GCGTTTATTC GCGAAGATGA ATGTATAGGG
TGCACAAAAT GCATTCAAGC TTGCCCCGTT GACGCGATTT TAGGCGCCGC CAAACAAATG
CATACCGTAA TAAGTGACGA ATGTACCGGC TGCGACTTAT GTGTCGACCC CTGCCCTGTT
GATTGTATTG ACATGATCCC TACGCAGACC ACGCCATCAT CATGGCGCTG GAACATTGAA
AGTATCCCCG TTAAGCAGGT GAGCTAA
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| Protein sequence | MSFMWAIFTA LIAVGLLALV FGAILGFASI RFKVEGDPLV EQIDELLPQT QCGQCGYPGC
KPYAQAIADG DDINKCPPGG DATIKRLADL MGVEATSLDA AHGSEDIKKV AFIREDECIG
CTKCIQACPV DAILGAAKQM HTVISDECTG CDLCVDPCPV DCIDMIPTQT TPSSWRWNIE
SIPVKQVS
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