Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2961 |
Symbol | |
ID | 4174729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3584552 |
End bp | 3585208 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638055984 |
Product | exsB protein |
Protein accession | YP_662523 |
Protein GI | 109899268 |
COG category | [R] General function prediction only |
COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
TIGRFAM ID | [TIGR00364] exsB protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTACAAA AGGTGGTGGT AATTTTTTCA GGAGGCATGG ATTCATTTAC CGTGCTAAAT ATGGCTGTCA AAGAGGGCTA TGAAGTGCAT GCCCTGTCTT TCAACTACGG ACAGCGCCAT AGCAAAGAAT TAGATTACGC CAGCCGAGCT TGTATAACCC TAGGCGTGGC GCATAAAATT ATTGATATAT CCGCAATCAA TGAGCTCATT GGTGGCTCGT CACTTACCTC TGATGTGGAT ATTCCAGAAG GGCATTATGC CGAAGAAAGC ATGAAGTCGA CCGTGGTCCC TAATCGCAAT ATGATTTTAT TATCCATGGC TGTAGGTTAC GCCGTTTCGC TGGATGCAAA TAAAGTGTAC TACGGAGCGC ATTCAGGCGA TCACGACATT TACCCTGATT GCCGCCCTGA ATTTGTTGAA CGCATGAATG ACGTCTGTGC AATTGCCAAC TATGAAAAAG TGGAAATCGT GTCTCCCTTT TTGTATCAAA GTAAAATAGA TATTTTAACC GCAGGGTTAA ACATGGGACT GGATTATAAC CTGACATGGA CGTGTTATAA CGGCCGAGAA AAAGCCTGTG GAAAATGCGG TGCCTGCCAA GAGCGCTTAG AGGCCTTTGA CAAAAATAAC GCGCAAGACC CATTAGAATA CGAATAA
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Protein sequence | MVQKVVVIFS GGMDSFTVLN MAVKEGYEVH ALSFNYGQRH SKELDYASRA CITLGVAHKI IDISAINELI GGSSLTSDVD IPEGHYAEES MKSTVVPNRN MILLSMAVGY AVSLDANKVY YGAHSGDHDI YPDCRPEFVE RMNDVCAIAN YEKVEIVSPF LYQSKIDILT AGLNMGLDYN LTWTCYNGRE KACGKCGACQ ERLEAFDKNN AQDPLEYE
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