| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2957 |
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| Symbol | |
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| ID | 4174725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3581278 |
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| End bp | 3582285 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055980 |
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| Product | zinc-binding alcohol dehydrogenase |
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| Protein accession | YP_662519 |
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| Protein GI | 109899264 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAGC CCAATACCTT TAACGCTTTG CTTGTTGAAG AGCATAATGA CAAATCATTC
AGCAAGAATA TCGTGCAGCG CAGCATCAGT GATTTACCAG ACAATGACGT GCTTATTGAA
GTACACTACT CATCACTTAA TTATAAAGAT GCTATGTCCG CCAGCGGCAA TAAACGCATC
AGCCAGCACT TTCCTCACAC ACCAGGCATA GATGCCGCCG GCATCGTGAT AAGCGACAAA
TCAGGCACGT TTAACGCTGG CGACGAGGTA TTGGTGTTCG GGTATGACTT AGGAATGAAT
ACCCCGGGCG GCCTTGGCCA AATAATATCT ATTCCCGCTG ATTGGGCCGT TGTCTGCCCT
GACACCTTGT CGTTAAAAGA AGCCATGACC TATGGTACTG GCGGACTTAC CGCGGCCCTT
TGTATTCAAA AGCTTGAGCA AATGGGCGCT AAGCCCAGTG ATGGTCCTGT GGCAATAACG
GGCGCCACCG GCGGCGTAGG CACAATTAGC ATCGCGCTAC TCAAACAATT GAGTTATGAA
GTGGTAGCAT TTTCAGGCAA ACCTGAGCAG TCATATAAGT TAAAAGCACT CGGTGCCAGT
GATGTCCTGC TCCGAGACAG TCTTTTAGAG GTTAAAGACG CCCTTGCAGG TAAGCCTAAG
TGGGCACACG CCATTGATAC CTTAGGGGGC GATTACCTAA CAGGGTTGTT AAAACAGCTT
AAGCCTGGCG GCGGTGTGGC GTCAGTTGGT TTAGCAGCCT CTGCGGACAT TGCCATGAGT
GTTATTCCTT TTATCACTCG TGGTATATCC CTACTAGGTG TGGACTCTGT GTATATTCCC
TTAAAAGACA AGAAGCACAT TTGGCAACGG GTCGCGACCG ACATGAAGCT ACCTAATTTA
GACCGCTATC AACAGGAAAT CACTTTGAGC CAAACTCCTG AATATTTGGA TAGATTTCTA
CAAGGCAAAG TGGTTGGCCG TTATGTGGTC AATGTAAAAG AGGCATAG
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| Protein sequence | MSQPNTFNAL LVEEHNDKSF SKNIVQRSIS DLPDNDVLIE VHYSSLNYKD AMSASGNKRI
SQHFPHTPGI DAAGIVISDK SGTFNAGDEV LVFGYDLGMN TPGGLGQIIS IPADWAVVCP
DTLSLKEAMT YGTGGLTAAL CIQKLEQMGA KPSDGPVAIT GATGGVGTIS IALLKQLSYE
VVAFSGKPEQ SYKLKALGAS DVLLRDSLLE VKDALAGKPK WAHAIDTLGG DYLTGLLKQL
KPGGGVASVG LAASADIAMS VIPFITRGIS LLGVDSVYIP LKDKKHIWQR VATDMKLPNL
DRYQQEITLS QTPEYLDRFL QGKVVGRYVV NVKEA
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