| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2955 |
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| Symbol | asnB |
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| ID | 4174723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3578144 |
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| End bp | 3579814 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055978 |
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| Product | asparagine synthetase B |
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| Protein accession | YP_662517 |
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| Protein GI | 109899262 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0286169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTGGTA TTTTCGGCAT TCTGGACATC AAAACTGATG TATCAGAACT TAGAACGCAA
GCATTAGAAC TTTCCAAATT ACTGCGCCAT CGCGGCCCTG ACTGGTCAGG TGTATGGAAT
AATGATAATG CCATTTTGTG TCACGAGCGC TTAGCGATCG TTGACGTTGA CAAAGGCGCG
CAACCACTTA TCAGCCGAAA TAATAATAAT GTACTTGCCG TTAATGGTGA GATATACAAC
CACAAGGCTC TTGAGCAAAA CCTCGCTCAA CCATATGATT TTAGAACAAA ATCTGACTGT
GAAGTTATTC TTCCGTTATA TGAACAGCAA GGTGTTGAGT TTATCGACCA ACTGCAAGGT
ATGTTCGCAT TCGTCTTGTA CGATCAAGCA CAAGATGCCT ACCTTATCGC TCGTGACCAC
ATGGGCATTA TTCCTTTGTA CACAGGGTTT GACGAGCACG GGAACTTCTA CGTGGCCTCT
GAAATGAAGT CTTTAGTGCC TGTTTGCAAG ACGGTACAAG AATTCCCTCC AGGACATTAT
CTTTGGAGTA AATCAGGCGA GCTGAAAAAA TACTATCAGC GCGACTGGAT GAGCTATGAA
AATATTAAAG ACAACACCAC TGATCTAAAC GATTTGAAAG TGGCATTTGA AAAGTCAGTC
AAATCTCATT TGATGTCTGA TGTGCCTTAC GGTGTGTTAC TTTCAGGCGG TTTAGATTCA
TCATTAGTAT CTGCTATTGC GGCCAAATAC GTGGCAAAGC GGGTTGAAGA CAATGACGAG
TCTGATGCTT GGTGGCCGCG TTTGCACTCT TTTGCTGTGG GTCTTGAAGG CGCGCCAGAT
TTAATCGCTG CGCAAAAAGT AGCAGATATG ATTGGCACAG TGCATCACGA AGTGCATTTC
ACCGTGCAAG AAGGCCTAGA TGCTATTCGT GACGTGATTT ACCATCTTGA AACTTACGAT
GTCACAACTA TTCGTGCCGC CACACCCATG TACCTAATGA GCCGTAAAAT CAAGGCTATG
GGGATTAAAA TGGTGTTGTC TGGTGAAGGC GCGGATGAAA TTTTTGGTGG CTATTTGTAT
TTCCACAAAG CACCAAACGC CAAAGAATTC CATGAAGAAA CCGTGCGTAA ACTTGAGCGT
TTACATATGT TTGATTGCGC TCGTGCAAAT AAATCTACCT CAGCTTGGGG CGTAGAAGCT
CGCGTACCAT TCCTTGATAA AGAATTCTTG GATGTCGCCA TGCGCTTAAA CCCACAAGAT
AAAATGTGTC TTGACGGCAA AATGGAAAAA TGGATTTTAC GTAAAGCGTT TGATAACGGT
GAGTACTTGC CTGCTGAAGT GCTATGGCGT CAAAAAGAGC AGTTCAGTGA TGGCGTAGGC
TATTCATGGA TTGACTCGAT TAAAGAAAAA GTCGAGCAAG ACATCACTGA TCAACAACTC
GCAACTGCTG CGTTCCGTTT CCCTATCAAT ACACCAGATA CGAAAGAAGG ATACTACTTC
CGTACAGTGT TTGAGTCTTT CTTCCCGCAA GAAAGTGCCG CAAACTGTGT ACCAGGTGGT
AAGTCAATCG CCTGCAGTAC CGTTGAAGCA CTCGAATGGG ATGCAAGCTT TAAAGGCAAT
GCTGACCCTT CGGGACGAGC TATGCGAGAT GTGCACAACC AAGCTAACTA G
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| Protein sequence | MCGIFGILDI KTDVSELRTQ ALELSKLLRH RGPDWSGVWN NDNAILCHER LAIVDVDKGA
QPLISRNNNN VLAVNGEIYN HKALEQNLAQ PYDFRTKSDC EVILPLYEQQ GVEFIDQLQG
MFAFVLYDQA QDAYLIARDH MGIIPLYTGF DEHGNFYVAS EMKSLVPVCK TVQEFPPGHY
LWSKSGELKK YYQRDWMSYE NIKDNTTDLN DLKVAFEKSV KSHLMSDVPY GVLLSGGLDS
SLVSAIAAKY VAKRVEDNDE SDAWWPRLHS FAVGLEGAPD LIAAQKVADM IGTVHHEVHF
TVQEGLDAIR DVIYHLETYD VTTIRAATPM YLMSRKIKAM GIKMVLSGEG ADEIFGGYLY
FHKAPNAKEF HEETVRKLER LHMFDCARAN KSTSAWGVEA RVPFLDKEFL DVAMRLNPQD
KMCLDGKMEK WILRKAFDNG EYLPAEVLWR QKEQFSDGVG YSWIDSIKEK VEQDITDQQL
ATAAFRFPIN TPDTKEGYYF RTVFESFFPQ ESAANCVPGG KSIACSTVEA LEWDASFKGN
ADPSGRAMRD VHNQAN
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