| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2954 |
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| Symbol | |
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| ID | 4174722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3576185 |
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| End bp | 3577828 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055977 |
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| Product | peptidase M28 |
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| Protein accession | YP_662516 |
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| Protein GI | 109899261 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000316234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA TTCAACTGGC CGCTATCCCG CTAATCAGCG CAACTTTGTT TGCCTGTGGT
GTGAATAGCG ATAACATCTC TACGTCCAGT GCAGATAACG ACTTTAGCCT TGCATATCAG
AACATTACAG ATGCAACGCT CAAAGCGCAC ACCAAAACCT TAGCCTCTGA TGAATTTGAA
GGACGCTCAC CCACCTCAAA AGGTGAGAAA GTCACTCTTG ATTATCTAGT CAGTAATTTT
AAGCAGATGG GCTATCAACC GGGTAACGGC GACAGCTATT TACAAGCGGT TAATCTATTA
GAAATGACAG CCTCACCAGA CATGACCATG ACCATAGGTG ACAACCAGTT CGCCTATAAA
GAAGGCATGA TTGCCTCAAC AAAACGCGAG CAACAGCAAG TCAGGGTGAC TGACTCGGAC
GTCGTATTTG TTGGCTTTGG CGTTAACGCC CCAGAATACG ATTGGAATGA CTACGAGGGC
CTTGATGTTA AAGGCAAAAC AGTGGTTATT CTGGTCAACG ACCCAGGCTT TGAGCGCCCT
GACAGCGGAA AATTTCAAGG GAAAACCATG ACCTATTATG GGCGCTGGAC TTACAAATAC
GAAGAAGCGA GCCGTCAAGG TGCAACCGCA GCAATCATAG TGCATGAAAC AGCCCCTGCA
TCTTATGGCT GGTCTGTAGT GGCAAATAGT TGGAGCGGTC CGCAATATAG CTTGGTCAGC
GAAAATGGCA ATGCAGATCG TGTTGCAGTG GAAGGTTGGT TGTCGAATGA TGCGGCAAAA
CAGGTTTTCT CGGCTGCCGG ATTAGATTTT GCCAAAGAAA AAGCCAAGGC CTTAAAAGGC
CCCTACCACA CTAGCCTAAA ACAAAAAGCC TCAGTGACGG TAAACAGCAC GATGAAAAAG
TCGGTTAGCT ATAATGTAAT GGCAACCCTA CCCGGCTCAG AAACACCTGA CGAGCATGTC
ATTTACAGTG CCCACTGGGA TCACTTAGGC AAAGACGAGA GCAAAGAAGG CGATAATATA
TACAATGGTG CGCACGACAA CGCCACAGGC ACAGCAAGCA CCCTTGCCAT AGCAAAAGCG
TTTAAAGCGC TGGGCTCTGC TCCAAAACGT TCTGTTGATT TTCTTATCGT CACCGCTGAA
GAACAAGGCT TACTGGGCTC ACAGTACTAC GCTGAACATC CAATTATTCC GCTAAACAAA
ACAGTCGCGA ATATCAATAT GGACGCCATG AACGTACTAG GGCGAACGAA AGATGTTTCA
GTTGTTGGCA TGGGCAAGTC AGAACTAGAA ACTTACTTGG CTAAAGCCGC AGCGCGTCAA
GACCGAACAT TAACCCAAGA ATCACGCCCT GAGGCCGGCT CATATTATCG TTCAGATCAT
TTCAGCTTCG CCAAACAAGG GGTGCCAGCT TTGTATGCGA AAGGGGGAAA TATCCCTATC
GATGCACAAA CCGCACAGTA CAAGAAGCGC ACTAAAGTAT TGATTACAGG CTGTTATCAC
CAAGTTTGCG ATCAATTCCG TGAAAACTGG GATTTTTCAG GTGTACGTGA AGATGCCCAA
CTGTTGTTCG AGGTAGGATA CGATATAGCC CAATCGGCAG ATTGGCCTAA GTGGAATGCC
AGCAGTGAGT TTCAGCGTAA GTAA
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| Protein sequence | MKRIQLAAIP LISATLFACG VNSDNISTSS ADNDFSLAYQ NITDATLKAH TKTLASDEFE
GRSPTSKGEK VTLDYLVSNF KQMGYQPGNG DSYLQAVNLL EMTASPDMTM TIGDNQFAYK
EGMIASTKRE QQQVRVTDSD VVFVGFGVNA PEYDWNDYEG LDVKGKTVVI LVNDPGFERP
DSGKFQGKTM TYYGRWTYKY EEASRQGATA AIIVHETAPA SYGWSVVANS WSGPQYSLVS
ENGNADRVAV EGWLSNDAAK QVFSAAGLDF AKEKAKALKG PYHTSLKQKA SVTVNSTMKK
SVSYNVMATL PGSETPDEHV IYSAHWDHLG KDESKEGDNI YNGAHDNATG TASTLAIAKA
FKALGSAPKR SVDFLIVTAE EQGLLGSQYY AEHPIIPLNK TVANINMDAM NVLGRTKDVS
VVGMGKSELE TYLAKAAARQ DRTLTQESRP EAGSYYRSDH FSFAKQGVPA LYAKGGNIPI
DAQTAQYKKR TKVLITGCYH QVCDQFRENW DFSGVREDAQ LLFEVGYDIA QSADWPKWNA
SSEFQRK
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