| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2948 |
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| Symbol | aspS |
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| ID | 4174716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3569143 |
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| End bp | 3570921 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055971 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_662510 |
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| Protein GI | 109899255 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACAG ATTATTGCGG CAACATCAAT GCATCACACA TCGGACAAAC AGTCACTCTT
TGCGGTTGGG TAAACCGTCG CCGCGATTTG GGTGGGGTTA TTTTTATCGA CTTGCGCGAC
CGCGAAGGTA TCGTTCAAGT GGTTTACGAT CCAGACTTGG CCGAATTGTT TGATACCGCA
AACAGCTTGC GTAGCGAATT TTGTGTTCAA ATTGAAGGTC TGGTTCGTGC TCGTCCGCAA
GGGCAAGTGA ATAAAGACAT GGGCACCGGC GAAATCGAAA TCTTAGGCAA AGGCTTAACG
ATTTTGAACA AATCAGCTGT CTTGCCACTG GACAGCAATC AAGAGAATTC AGAAGAGCAG
CGTTTAAAAT ATCGCTACCT TGATCTTCGT CGCCCAGTGA TGAGTGACCG TCTTAAGTTT
CGTGCAAAAG TCACCAGCGC CGTACGCAGT TATCTTGAAG GCGACGGCTT CCTTGATATC
GAAACGCCTA TGCTGACCAA AGCGACCCCT GAAGGCGCCC GGGATTATTT AGTGCCAAGT
CGTACCCATA AAGGGAAGTT CTTTGCGTTA CCCCAGTCAC CTCAATTGTT TAAGCAATTG
TTGATGATGT CCGGTATGGA CCGCTACTAC CAAATCGTTA AATGTTTCCG TGACGAAGAT
TTACGTGCCG ATCGTCAGCC TGAATTTACT CAAATCGATA TCGAGACCAC CTTTCTGGGT
GCCGAGCAAG TAATGAAAAT CACTGAAGGG ATGATCCGCA ACTTGTTCAT GAAAATGCTG
AACGTTGATT TAGGCGAATT CCCGCAAATG ACTTATGCCG ATGCCATGCG CCGATTTGGC
AGTGACAAGC CTGATTTACG TAACCCATTA GAGTTGGTTG ACGTGGCGGA CATCTTAAAA
GATGTAGAGT TTAAAGTGTT CTCTGGTCCG GCAAATGATG CTAAAGGCCG CGTAGCGGTT
ATTCGCGTGC CAGGCGGTGC GAGCATGACC CGTAAGCAAA TCGATGAATA CACTAAATTT
GTCGGGATTT ATGGTGCTAA AGGCCTAGCG TGGATGAAAG TAAACGATAT CGATGCGGGC
CTTGAAGGTT TGCAATCGCC TATCTTGAAA TTTTTAGGTG AAGATGTGGC CAAGCAAGTG
CTATCAAGAG TTGAAGCACA AAGCGGTGAT ATTCTATTGT TTGGGGCTGA CAGCGCAACG
GTTGTAACCG AAGCATTGGG GGCACTGCGC TTGAAAGTGG GTGAAGATTT AGACTTGCTT
GAAGGTGAGT GGAAACCGCT TTGGGTGATT GACTTCCCTA TGTTTGAAGA ATTCGATGGC
CAGTTTTATG CGCTGCATCA TCCATTTACC GCTCCTCGTG ATATGACGGC AGAGCAACTT
GCTGCAGACC CCGCCAATGC GTTATCAAAT GCTTATGACA TGGTATTGAA CGGCTGTGAA
TTAGGCGGTG GTTCGGTGCG TATTCATAAC CAAGACATGC AAGCTAAAGT GTTTAATATC
TTGGGGATCA GCGAAGAAGA AGCGGAAGTG AAATTTGGCT TCTTACTGGA TGCCCTTAAA
TTTGGTGCGC CACCTCATGC CGGTTTAGCA TTTGGTTTAG ACCGCTTAGT AATGCTGATG
ACGGGTGCAA CGTCTATTCG TGACGTGATG GCGTTCCCGA AAACAACGAC TGCTGCGTGT
CCATTAACGG ATGCGCCTGG TATTGCCAGT GACGAGCAAT TGAAAGAGTT GTCAATCAAG
ACTGACATCG TTCAGGAAAA AGCCCCAAGC GCGGAGTAA
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| Protein sequence | MRTDYCGNIN ASHIGQTVTL CGWVNRRRDL GGVIFIDLRD REGIVQVVYD PDLAELFDTA
NSLRSEFCVQ IEGLVRARPQ GQVNKDMGTG EIEILGKGLT ILNKSAVLPL DSNQENSEEQ
RLKYRYLDLR RPVMSDRLKF RAKVTSAVRS YLEGDGFLDI ETPMLTKATP EGARDYLVPS
RTHKGKFFAL PQSPQLFKQL LMMSGMDRYY QIVKCFRDED LRADRQPEFT QIDIETTFLG
AEQVMKITEG MIRNLFMKML NVDLGEFPQM TYADAMRRFG SDKPDLRNPL ELVDVADILK
DVEFKVFSGP ANDAKGRVAV IRVPGGASMT RKQIDEYTKF VGIYGAKGLA WMKVNDIDAG
LEGLQSPILK FLGEDVAKQV LSRVEAQSGD ILLFGADSAT VVTEALGALR LKVGEDLDLL
EGEWKPLWVI DFPMFEEFDG QFYALHHPFT APRDMTAEQL AADPANALSN AYDMVLNGCE
LGGGSVRIHN QDMQAKVFNI LGISEEEAEV KFGFLLDALK FGAPPHAGLA FGLDRLVMLM
TGATSIRDVM AFPKTTTAAC PLTDAPGIAS DEQLKELSIK TDIVQEKAPS AE
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