| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2943 |
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| Symbol | |
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| ID | 4174711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3565305 |
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| End bp | 3565727 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638055966 |
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| Product | 4-hydroxybenzoyl-CoA thioesterase |
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| Protein accession | YP_662505 |
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| Protein GI | 109899250 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000565224 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACGTTGC AGAAAAACTT AGCAGTATTT GAACACCAAA TAAGGGTGTA TTATGAAGAT
ACGGATGCAG GCGGAATTGT TTATTACGCG AATTATTTGA AGTTTCTAGA GCGCGCCAGA
ACAGAGTGGT TGCGCTCGAT GGGGATTGAA CAAGATGGGT TATTGGAACG ATCTATCGGT
TTTGTCGTCA AACGTGTCGA AATGGACAAT CAAGCGCCTG CACGATTTAA TGAACTATTG
AGAATTCAAA GCGAAATAGT AGAATTGAAA CGCGCAAGTT TGGTGTTCAA ACAAACAATA
ATAAGTCCAA GTGGTCAACG CTTGGTCAGT GCTTTAATTA GGGTGGCGTG CGTGGACCTT
CAGCAAATGA AACCTATCGC CATCCCCGGA TTTATACTAG AGGAATTCTC GCGTGTCGGC
TGA
|
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| Protein sequence | MTLQKNLAVF EHQIRVYYED TDAGGIVYYA NYLKFLERAR TEWLRSMGIE QDGLLERSIG
FVVKRVEMDN QAPARFNELL RIQSEIVELK RASLVFKQTI ISPSGQRLVS ALIRVACVDL
QQMKPIAIPG FILEEFSRVG
|
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