| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2941 |
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| Symbol | |
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| ID | 4174709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3564170 |
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| End bp | 3564592 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055964 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_662503 |
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| Protein GI | 109899248 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000159512 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATGTAA GAAAACGCCG TCGTCCGGTG TCTGAAATCA ATGTTGTGCC CTACATCGAT
GTGATGTTGG TGTTGCTGAT TATCTTTATG GTAACCGCAC CGCTTGTGAC TCAAGGTGTT
AAGGTAGATT TACCAAAAGC AGAAGCGCAA CCGCTAGAAG ATGATAGCAA GCCACCGCTA
ATTGCTTCCG TTGATGCAGA TGGAAATTAC TTCCTGAATA TCGCTGAAGA CCAAGAGCAG
GCCATGACAG CTGTAGATGT GGCCACGTTA GTTGCGGCGC ATTTGCGAAT TGAACCTGAA
ACCCCAGTCG TGGTGAAAGG GGATGGCGCA GTGCCGTACA GCAATATAGT GCAGTTGATG
GTGCTTTTGC AGCGTGCTGG TGCGCCTTCT GTCGGTCTTA TGACTGACCC TCCTGAGAAA
TAA
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| Protein sequence | MYVRKRRRPV SEINVVPYID VMLVLLIIFM VTAPLVTQGV KVDLPKAEAQ PLEDDSKPPL
IASVDADGNY FLNIAEDQEQ AMTAVDVATL VAAHLRIEPE TPVVVKGDGA VPYSNIVQLM
VLLQRAGAPS VGLMTDPPEK
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